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FASTA Sequence PDB Format mmCIF Format
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7AAP

Nsp7-nsp8-nsp12 sars-cov2 rna-dependent rna polymerase in complex with template:primer dsrna and favipiravir-rtp

PDB DOI: 10.2210/pdb7aap/pdb

Classification: VIRAL PROTEIN
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2020-09-04
Deposition Author(s): Barford, D. , Castro-Hartman, P. , Coscia, F. , Dent, K. , Kimanius, D. , Lowe, J. , Muir, K.W. , Naydenova, K. , Peet, M. , Qian, P. , Russo, C.J. , Sader, K. , Sutherland, J.D. , Wu, L.F. , Zhang, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.5 Å

7aap
Literature

Nsp7-nsp8-nsp12 sars-cov2 rna-dependent rna polymerase in complex with template:primer dsrna and favipiravir-rtp

Barford, D. , Castro-Hartman, P. , Coscia, F. , Dent, K. , Kimanius, D. , Lowe, J. , Muir, K.W. , Naydenova, K. , Peet, M. , Qian, P. , Russo, C.J. , Sader, K. , Sutherland, J.D. , Wu, L.F. , Zhang, Z.

Primary Citation of Related Structures: 7AAP


Proteins
Molecule Chains Sequence Length Organism Sequence
Non-structural protein 12 A 967 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQENLYFQSWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Non-structural protein 8 B 198 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct AIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQ
Non-structural protein 8 D 198 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct AIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQ
Non-structural protein 7 C 83 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct SKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*UP*AP*AP*GP*UP*UP*AP*U)-3') p 24 NA CAGUGCUAUGUGAGAUUAAGUUAU
RNA (5'-R(P*UP*UP*CP*AP*UP*AP*AP*CP*UP*UP*AP*A)-3') t 30 NA UUUUUCAUAACUUAAUCUCACAUAGCACUG
Experimental Data

Method: ELECTRON MICROSCOPY