Crystal structure of the thermus thermophilus 70s ribosome in complex with methymycin and bound to mrna and a-, p- and e-site trnas at 2.7a resolution Deposition Author(s): Almutairi, M.M. , Hansen, D.A. , Kang, H.Y. , Khabibullina, N.F. , Klepacki, D. , Mankin, A.S. , Polikanov, Y.S. , Sherman, D.H. , Svetlov, M.S. , Vazquez-Laslop, N.
Date: 2017-07-20 Method: X-RAY DIFFRACTION Resolution: 2.703 Å Organism(s): Escherichia Coli , Thermus Thermophilus , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 5WIS_1A , 5WIS_2A , 5WIS_1O , 5WIS_2O , 5WIS_1P , 5WIS_2P , 5WIS_1Q , 5WIS_2Q , 5WIS_1R , 5WIS_2R , 5WIS_1S , 5WIS_2S , 5WIS_1T , 5WIS_2T , 5WIS_1U , 5WIS_2U , 5WIS_1V , 5WIS_2V , 5WIS_1W , 5WIS_2W , 5WIS_1X , 5WIS_2X , 5WIS_1B , 5WIS_2B , 5WIS_1Y , 5WIS_2Y , 5WIS_1Z , 5WIS_2Z , 5WIS_10 , 5WIS_20 , 5WIS_11 , 5WIS_21 , 5WIS_12 , 5WIS_22 , 5WIS_13 , 5WIS_23 , 5WIS_14 , 5WIS_24 , 5WIS_15 , 5WIS_25 , 5WIS_16 , 5WIS_26 , 5WIS_17 , 5WIS_27 , 5WIS_1D , 5WIS_2D , 5WIS_18 , 5WIS_28 , 5WIS_19 , 5WIS_29 , 5WIS_1C , 5WIS_2C , 5WIS_1E , 5WIS_2E , 5WIS_1F , 5WIS_2F , 5WIS_1G , 5WIS_2G , 5WIS_1H , 5WIS_2H , 5WIS_1I , 5WIS_2I , 5WIS_1J , 5WIS_2J , 5WIS_1K , 5WIS_2K , 5WIS_1L , 5WIS_2L , 5WIS_1M , 5WIS_2M , 5WIS_1N , 5WIS_2N
Crystal structure of the thermus thermophilus 70s ribosome in complex with pikromycin and bound to mrna and a-, p- and e-site trnas at 2.6a resolution Deposition Author(s): Almutairi, M.M. , Hansen, D.A. , Kang, H.Y. , Khabibullina, N.F. , Klepacki, D. , Mankin, A.S. , Polikanov, Y.S. , Sherman, D.H. , Svetlov, M.S. , Vazquez-Laslop, N.
Date: 2017-07-20 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 5WIT_1A , 5WIT_2A , 5WIT_1O , 5WIT_2O , 5WIT_1P , 5WIT_2P , 5WIT_1Q , 5WIT_2Q , 5WIT_1R , 5WIT_2R , 5WIT_1S , 5WIT_2S , 5WIT_1T , 5WIT_2T , 5WIT_1U , 5WIT_2U , 5WIT_1V , 5WIT_2V , 5WIT_1W , 5WIT_2W , 5WIT_1X , 5WIT_2X , 5WIT_1B , 5WIT_2B , 5WIT_1Y , 5WIT_2Y , 5WIT_1Z , 5WIT_2Z , 5WIT_10 , 5WIT_20 , 5WIT_11 , 5WIT_21 , 5WIT_12 , 5WIT_22 , 5WIT_13 , 5WIT_23 , 5WIT_14 , 5WIT_24 , 5WIT_15 , 5WIT_25 , 5WIT_16 , 5WIT_26 , 5WIT_17 , 5WIT_27 , 5WIT_1D , 5WIT_2D , 5WIT_18 , 5WIT_28 , 5WIT_19 , 5WIT_29 , 5WIT_1C , 5WIT_2C , 5WIT_1E , 5WIT_2E , 5WIT_1F , 5WIT_2F , 5WIT_1G , 5WIT_2G , 5WIT_1H , 5WIT_2H , 5WIT_1I , 5WIT_2I , 5WIT_1J , 5WIT_2J , 5WIT_1K , 5WIT_2K , 5WIT_1L , 5WIT_2L , 5WIT_1M , 5WIT_2M , 5WIT_1N , 5WIT_2N
50s ribosomal subunit without free 5s rrna and perturbed ptc Deposition Author(s): Aleksashin, N.A. , Huang, S. , Jaeger, L. , Kefi, A. , Klepacki, D. , Korostelev, A.A. , Loveland, A.B. , Mankin, A.S. , Reier, K. , Remme, J. , Szal, A. , Vazquez-Laslop, N.
Date: 2020-04-23 Method: ELECTRON MICROSCOPY Resolution: 3.1 Å Organism(s): Escherichia Coli Sequences Data: 6WNT_B , 6WNT_K , 6WNT_L , 6WNT_N , 6WNT_O , 6WNT_P , 6WNT_Q , 6WNT_R , 6WNT_S , 6WNT_T , 6WNT_U , 6WNT_C , 6WNT_V , 6WNT_W , 6WNT_X , 6WNT_Y , 6WNT_Z , 6WNT_A , 6WNT_D , 6WNT_E , 6WNT_F , 6WNT_4 , 6WNT_G , 6WNT_H , 6WNT_I , 6WNT_J
70s ribosome without free 5s rrna and with a perturbed ptc Deposition Author(s): Aleksashin, N.A. , Huang, S. , Jaeger, L. , Kefi, A. , Klepacki, D. , Korostelev, A.A. , Loveland, A.B. , Mankin, A.S. , Reier, K. , Remme, J. , Szal, A. , Vazquez-Laslop, N.
Date: 2020-04-23 Method: ELECTRON MICROSCOPY Resolution: 3.5 Å Organism(s): Escherichia Coli Sequences Data: 6WNV_B , 6WNV_K , 6WNV_L , 6WNV_N , 6WNV_O , 6WNV_P , 6WNV_Q , 6WNV_R , 6WNV_S , 6WNV_T , 6WNV_U , 6WNV_C , 6WNV_V , 6WNV_W , 6WNV_X , 6WNV_Y , 6WNV_Z , 6WNV_A , 6WNV_D , 6WNV_E , 6WNV_F , 6WNV_G , 6WNV_H , 6WNV_I , 6WNV_J , 6WNV_M , 6WNV_3 , 6WNV_4
Active 70s ribosome without free 5s rrna and bound with a- and p- trna Deposition Author(s): Aleksashin, N.A. , Huang, S. , Jaeger, L. , Kefi, A. , Klepacki, D. , Korostelev, A.A. , Loveland, A.B. , Mankin, A.S. , Reier, K. , Remme, J. , Szal, A. , Vazquez-Laslop, N.
Date: 2020-04-23 Method: ELECTRON MICROSCOPY Resolution: 3.2 Å Organism(s): Escherichia Coli Sequences Data: 6WNW_B , 6WNW_K , 6WNW_L , 6WNW_M , 6WNW_N , 6WNW_O , 6WNW_P , 6WNW_Q , 6WNW_R , 6WNW_S , 6WNW_T , 6WNW_C , 6WNW_U , 6WNW_V , 6WNW_W , 6WNW_X , 6WNW_Y , 6WNW_Z , 6WNW_A , 6WNW_D , 6WNW_E , 6WNW_F , 6WNW_G , 6WNW_H , 6WNW_I , 6WNW_J , 6WNW_3 , 6WNW_4 , 6WNW_5 , 6WNW_1 , 6WNW_7
Cryo-em structure of an escherichia coli tnac-ribosome complex stalled in response to l-tryptophan Deposition Author(s): Cruz-Vera, L.R. , Gordon, E.R. , Herrero Del Valle, A. , Innis, C.A. , Klepacki, D. , Martinez, A.K. , Perry, T.N. , Sachs, M.S. , Sengupta, A. , Van Der Stel, A.X. , Vazquez-Laslop, N.
Date: 2021-03-29 Method: ELECTRON MICROSCOPY Resolution: 2.9 Å Organism(s): Escherichia Coli K-12 , Synthetic Construct Sequences Data: 7O19_AA , 7O19_AJ , 7O19_AK , 7O19_AL , 7O19_AM , 7O19_AN , 7O19_AO , 7O19_AP , 7O19_AQ , 7O19_AR , 7O19_AS , 7O19_AB , 7O19_AT , 7O19_AU , 7O19_BA , 7O19_BB , 7O19_BC , 7O19_BD , 7O19_BE , 7O19_BF , 7O19_BG , 7O19_BH , 7O19_AC , 7O19_BI , 7O19_BJ , 7O19_BK , 7O19_BL , 7O19_BM , 7O19_BN , 7O19_BO , 7O19_BP , 7O19_BQ , 7O19_BR , 7O19_AD , 7O19_BS , 7O19_BT , 7O19_BU , 7O19_BV , 7O19_BW , 7O19_BX , 7O19_BY , 7O19_BZ , 7O19_B0 , 7O19_B1 , 7O19_AE , 7O19_B2 , 7O19_B3 , 7O19_B4 , 7O19_B5 , 7O19_B7 , 7O19_B8 , 7O19_AF , 7O19_AG , 7O19_AH , 7O19_AI
Cryo-em structure of an escherichia coli tnac(r23f)-ribosome complex stalled in response to l-tryptophan Deposition Author(s): Cruz-Vera, L.R. , Gordon, E.R. , Herrero Del Valle, A. , Innis, C.A. , Klepacki, D. , Martinez, A.K. , Perry, T.N. , Sachs, M.S. , Sengupta, A. , Van Der Stel, A.X. , Vazquez-Laslop, N.
Date: 2021-03-29 Method: ELECTRON MICROSCOPY Resolution: 2.4 Å Organism(s): Escherichia Coli (Strain K12) , Escherichia Coli K-12 , Synthetic Construct Sequences Data: 7O1A_AA , 7O1A_AJ , 7O1A_AK , 7O1A_AL , 7O1A_AM , 7O1A_AN , 7O1A_AO , 7O1A_AP , 7O1A_AQ , 7O1A_AR , 7O1A_AS , 7O1A_AB , 7O1A_AT , 7O1A_AU , 7O1A_BA , 7O1A_BB , 7O1A_BC , 7O1A_BD , 7O1A_BE , 7O1A_BF , 7O1A_BG , 7O1A_BH , 7O1A_AC , 7O1A_BI , 7O1A_BJ , 7O1A_BK , 7O1A_BL , 7O1A_BM , 7O1A_BN , 7O1A_BO , 7O1A_BP , 7O1A_BQ , 7O1A_BR , 7O1A_AD , 7O1A_BS , 7O1A_BT , 7O1A_BU , 7O1A_BV , 7O1A_BW , 7O1A_BX , 7O1A_BY , 7O1A_BZ , 7O1A_B0 , 7O1A_B1 , 7O1A_AE , 7O1A_B2 , 7O1A_B3 , 7O1A_B4 , 7O1A_B5 , 7O1A_B7 , 7O1A_B8 , 7O1A_AF , 7O1A_AG , 7O1A_AH , 7O1A_AI
Cryo-em structure of an escherichia coli tnac(r23f)-ribosome-rf2 complex stalled in response to l-tryptophan Deposition Author(s): Cruz-Vera, L.R. , Gordon, E.R. , Herrero Del Valle, A. , Innis, C.A. , Klepacki, D. , Martinez, A.K. , Perry, T.N. , Sachs, M.S. , Sengupta, A. , Van Der Stel, A.X. , Vazquez-Laslop, N.
Date: 2021-03-29 Method: ELECTRON MICROSCOPY Resolution: 2.6 Å Organism(s): Escherichia Coli (Strain K12) , Escherichia Coli K-12 , Synthetic Construct Sequences Data: 7O1C_AA , 7O1C_AJ , 7O1C_AK , 7O1C_AL , 7O1C_AM , 7O1C_AN , 7O1C_AO , 7O1C_AP , 7O1C_AQ , 7O1C_AR , 7O1C_AS , 7O1C_AB , 7O1C_AT , 7O1C_AU , 7O1C_BA , 7O1C_BB , 7O1C_BC , 7O1C_BD , 7O1C_BE , 7O1C_BF , 7O1C_BG , 7O1C_BH , 7O1C_AC , 7O1C_BI , 7O1C_BJ , 7O1C_BK , 7O1C_BL , 7O1C_BM , 7O1C_BN , 7O1C_BO , 7O1C_BP , 7O1C_BQ , 7O1C_BR , 7O1C_AD , 7O1C_BS , 7O1C_BT , 7O1C_BU , 7O1C_BV , 7O1C_BW , 7O1C_BX , 7O1C_BY , 7O1C_BZ , 7O1C_B0 , 7O1C_B1 , 7O1C_AE , 7O1C_B2 , 7O1C_B3 , 7O1C_B4 , 7O1C_B5 , 7O1C_B7 , 7O1C_B8 , 7O1C_B9 , 7O1C_AF , 7O1C_AG , 7O1C_AH , 7O1C_AI
Crystal structure of the wild-type thermus thermophilus 70s ribosome in complex with iboxamycin, mrna, deacylated a- and e-site trnas, and aminoacylated p-site trna at 2.50a resolution Deposition Author(s): Chatman, K. , Klepacki, D. , Ladley, R.P. , Mankin, A.S. , Mason, J.D. , Mitcheltree, M.J. , Myers, A.G. , Pisipati, A. , Polikanov, Y.S. , Pote, A.R. , Silvestre, K.J. , Syroegin, E.A. , Terwilliger, D.W. , Testolin, G. , Wu, K.J.Y.
Date: 2021-08-06 Method: X-RAY DIFFRACTION Resolution: 2.5 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 7RQ8_1A , 7RQ8_2A , 7RQ8_1O , 7RQ8_2O , 7RQ8_1P , 7RQ8_2P , 7RQ8_1Q , 7RQ8_2Q , 7RQ8_1R , 7RQ8_2R , 7RQ8_1S , 7RQ8_2S , 7RQ8_1T , 7RQ8_2T , 7RQ8_1U , 7RQ8_2U , 7RQ8_1V , 7RQ8_2V , 7RQ8_1W , 7RQ8_2W , 7RQ8_1X , 7RQ8_2X , 7RQ8_1B , 7RQ8_2B , 7RQ8_1Y , 7RQ8_2Y , 7RQ8_1Z , 7RQ8_2Z , 7RQ8_10 , 7RQ8_20 , 7RQ8_11 , 7RQ8_21 , 7RQ8_12 , 7RQ8_22 , 7RQ8_13 , 7RQ8_23 , 7RQ8_14 , 7RQ8_24 , 7RQ8_15 , 7RQ8_25 , 7RQ8_16 , 7RQ8_26 , 7RQ8_17 , 7RQ8_27 , 7RQ8_1D , 7RQ8_2D , 7RQ8_18 , 7RQ8_28 , 7RQ8_19 , 7RQ8_29 , 7RQ8_1C , 7RQ8_2C , 7RQ8_1E , 7RQ8_2E , 7RQ8_1F , 7RQ8_2F , 7RQ8_1G , 7RQ8_2G , 7RQ8_1H , 7RQ8_2H , 7RQ8_1I , 7RQ8_2I , 7RQ8_1J , 7RQ8_2J , 7RQ8_1K , 7RQ8_2K , 7RQ8_1L , 7RQ8_2L , 7RQ8_1M , 7RQ8_2M , 7RQ8_1N , 7RQ8_2N
Crystal structure of the a2058-dimethylated thermus thermophilus 70s ribosome in complex with iboxamycin, mrna, deacylated a- and e-site trnas, and aminoacylated p-site trna at 2.60a resolution Deposition Author(s): Chatman, K. , Klepacki, D. , Ladley, R.P. , Mankin, A.S. , Mason, J.D. , Mitcheltree, M.J. , Myers, A.G. , Pisipati, A. , Polikanov, Y.S. , Pote, A.R. , Silvestre, K.J. , Syroegin, E.A. , Terwilliger, D.W. , Testolin, G. , Wu, K.J.Y.
Date: 2021-08-06 Method: X-RAY DIFFRACTION Resolution: 2.6 Å Organism(s): Escherichia Coli , Thermus Thermophilus (Strain Hb8 / Atcc 27634 / Dsm 579) , Thermus Thermophilus Hb8 , Synthetic Construct Sequences Data: 7RQ9_1A , 7RQ9_2A , 7RQ9_1O , 7RQ9_2O , 7RQ9_1P , 7RQ9_2P , 7RQ9_1Q , 7RQ9_2Q , 7RQ9_1R , 7RQ9_2R , 7RQ9_1S , 7RQ9_2S , 7RQ9_1T , 7RQ9_2T , 7RQ9_1U , 7RQ9_2U , 7RQ9_1V , 7RQ9_2V , 7RQ9_1W , 7RQ9_2W , 7RQ9_1X , 7RQ9_2X , 7RQ9_1B , 7RQ9_2B , 7RQ9_1Y , 7RQ9_2Y , 7RQ9_1Z , 7RQ9_2Z , 7RQ9_10 , 7RQ9_20 , 7RQ9_11 , 7RQ9_21 , 7RQ9_12 , 7RQ9_22 , 7RQ9_13 , 7RQ9_23 , 7RQ9_14 , 7RQ9_24 , 7RQ9_15 , 7RQ9_25 , 7RQ9_16 , 7RQ9_26 , 7RQ9_17 , 7RQ9_27 , 7RQ9_1D , 7RQ9_2D , 7RQ9_18 , 7RQ9_28 , 7RQ9_19 , 7RQ9_29 , 7RQ9_1C , 7RQ9_2C , 7RQ9_1E , 7RQ9_2E , 7RQ9_1F , 7RQ9_2F , 7RQ9_1G , 7RQ9_2G , 7RQ9_1H , 7RQ9_2H , 7RQ9_1I , 7RQ9_2I , 7RQ9_1J , 7RQ9_2J , 7RQ9_1K , 7RQ9_2K , 7RQ9_1L , 7RQ9_2L , 7RQ9_1M , 7RQ9_2M , 7RQ9_1N , 7RQ9_2N