32NJ
Cryo-em structure of skm-m.smegmatis 70s ribosomal complex
PDB DOI: 10.2210/pdb32nj/pdb
Classification: RIBOSOME Organism(s): Mycolicibacterium Smegmatis
Deposited: 2026-07-16 Deposition Author(s): Av-Gay, Y. , Ben-Zion, I. , Berger, M. , Bond, A. , Cook, M.A. , Corazza, M. , Dhar, N. , Ejim, L. , Fitzgerald, M. , Golas, A.J. , Gomez, J. , Guitor, A.K. , Hackenberger, D. , Hung, D.T. , Klepacki, D. , Mankin, A. , Morici, M. , Nandini, N. , Nietupski, R.M. , Rao, V.N. , Safdari, H.A. , Sahile, H. , Schaenzer, A.J. , Surette, M.G. , Tertigas, D. , Travin, D.T. , Vazquez Laslop, N. , Wang, L. , Wang, W. , Wilson, D.N. , Wright, G.D. , Xu, M. , Yarlagadda, V.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.0 Å
Cryo-em structure of skm-m.smegmatis 70s ribosomal complex
Av-Gay, Y. , Ben-Zion, I. , Berger, M. , Bond, A. , Cook, M.A. , Corazza, M. , Dhar, N. , Ejim, L. , Fitzgerald, M. , Golas, A.J. , Gomez, J. , Guitor, A.K. , Hackenberger, D. , Hung, D.T. , Klepacki, D. , Mankin, A. , Morici, M. , Nandini, N. , Nietupski, R.M. , Rao, V.N. , Safdari, H.A. , Sahile, H. , Schaenzer, A.J. , Surette, M.G. , Tertigas, D. , Travin, D.T. , Vazquez Laslop, N. , Wang, L. , Wang, W. , Wilson, D.N. , Wright, G.D. , Xu, M. , Yarlagadda, V.
Primary Citation of Related Structures: 32NJ
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 16S rRNA | a | 1528 | NA | UUUUUGUUUGGAGAGUUUGAUCCUGGCUCAGGACGAACGCUGGCGGCGUGCUUAACACAUGCAAGUCGAACGGAAAGGCCCUUUCGGGGGUACUCGAGUGGCGAACGGGUGAGUAACACGUGGGUGAUCUGCCCUGCACUUUGGGAUAAGCCUGGGAAACUGGGUCUAAUACCGAAUACACCCUGCUGGUCGCAUGGCCUGGUAGGGGAAAGCUUUUGCGGUGUGGGAUGGGCCCGCGGCCUAUCAGCUUGUUGGUGGGGUGAUGGCCUACCAAGGCGACGACGGGUAGCCGGCCUGAGAGGGUGACCGGCCACACUGGGACUGAGAUACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCGACGCCGCGUGAGGGAUGACGGCCUUCGGGUUGUAAACCUCUUUCAGCACAGACGAAGCGCAAGUGACGGUAUGUGCAGAAGAAGGACCGGCCAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGUCCGAGCGUUGUCCGGAAUUACUGGGCGUAAAGAGCUCGUAGGUGGUUUGUCGCGUUGUUCGUGAAAACUCACAGCUUAACUGUGGGCGUGCGGGCGAUACGGGCAGACUAGAGUACUGCAGGGGAGACUGGAAUUCCUGGUGUAGCGGUGGAAUGCGCAGAUAUCAGGAGGAACACCGGUGGCGAAGGCGGGUCUCUGGGCAGUAACUGACGCUGAGGAGCGAAAGCGUGGGGAGCGAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGGUGGGUACUAGGUGUGGGUUUCCUUCCUUGGGAUCCGUGCCGUAGCUAACGCAUUAAGUACCCCGCCUGGGGAGUACGGCCGCAAGGCUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGCGGAGCAUGUGGAUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGGUUUGACAUGCACAGGACGCCGGCAGAGAUGUCGGUUCCCUUGUGGCCUGUGUGCAGGUGGUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUGUCUCAUGUUGCCAGCACGUUAUGGUGGGGACUCGUGAGAGACUGCCGGGGUCAACUCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGCCCCUUAUGUCCAGGGCUUCACACAUGCUACAAUGGCCGGUACAAAGGGCUGCGAUGCCGUGAGGUGGAGCGAAUCCUUUCAAAGCCGGUCUCAGUUCGGAUCGGGGUCUGCAACUCGACCCCGUGAAGUCGGAGUCGCUAGUAAUCGCAGAUCAGCAACGCUGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGUCAUGAAAGUCGGUAACACCCGAAGCCGGUGGCCUAACCCUUGUGGAGGGAGCCGUCGAAGGUGGGAUCGGCGAUUGGGACGAAGUCGUAACAAGGUAGCCGUACCGGAAGGUGCGGCUGGAUCACCUCCUUUCU |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Small ribosomal subunit protein uS10 | J | 101 | Mycolicibacterium Smegmatis | MAGQKIRIRLKAYDHEAIDASARKIVETVTRTGASVVGPVPLPTEKNVYCVIRSPHKYKDSREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ |
| Small ribosomal subunit protein uS11 | K | 138 | Mycolicibacterium Smegmatis | MAQAKKGGTAAKKGQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGNVIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGCRPPKRRRV |
| Small ribosomal subunit protein uS12 | L | 124 | Mycolicibacterium Smegmatis | MPTIQQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGSLDTQGVKNRKQARSRYGAKKEKS |
| Small ribosomal subunit protein uS14B | N | 61 | Mycolicibacterium Smegmatis | MAKKALVHKANKKPKFAVRAYTRCNKCGRPHSVYRKFGLCRICLREMAHAGELPGVQKSSW |
| Small ribosomal subunit protein uS15 | O | 89 | Mycolicibacterium Smegmatis | MALTAEQKKEILGQYGLHDTDTGSPEAQVALLTKRIQDLTEHLKVHKHDHHSRRGLLLLVGRRRRLLKYVAQVDVARYRSLIERLGLRR |
| Small ribosomal subunit protein bS16 | P | 156 | Mycolicibacterium Smegmatis | MAVKIKLTRLGKIRNPQYRIIVADARTRRDGRAIEVIGRYHPKEEPSLIQIDSERAQYWLGVGAQPTEPVLALLKITGDWQKFKGLPGAEGTLKVKEPKPSKLDLFNAALAEAESGTTAAATTPKKKKAPKKDEAAEAPAEAAEAPAEAADAASES |
| Small ribosomal subunit protein uS17 | Q | 98 | Mycolicibacterium Smegmatis | MADQKGPKYTPAAEKPRGRRKTAIGYVVSDKMQKTIVVELEDRKSHPLYGKIIRTTKKVKAHDENGEAGIGDRVSLMETRPLSATKRWRLVEILEKAK |
| Small ribosomal subunit protein bS18B | R | 84 | Mycolicibacterium Smegmatis | MAKSNKRRPAPEKPVKTRKCVFCSKKGQTIDYKDTALLRTYISERGKIRARRVTGNCVQHQRDIAVAVKNAREVALLPFGSSTR |
| Small ribosomal subunit protein bS20 | T | 86 | Mycolicibacterium Smegmatis | MANIKSQIKRIRTNERRRLRNQSVKSSLRTAIRGFREAVDAGDKDKASELLHATSRKLDKAASKGVIHPNQAANKKSALALALNKL |
| Small ribosomal subunit protein bS22 | X | 33 | Mycolicibacterium Smegmatis | MGSVIKKRRKRMSKKKHRKLLRRTRVQRRKLGK |
| Small ribosomal subunit protein uS3 | C | 275 | Mycolicibacterium Smegmatis | MGQKINPHGFRLGITTEWKSRWYADKQYKDYVKEDVAIRKLLATGLERAGIADVEIERTRDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGVAEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAAPASDRPRRERPSGTRPRRSGSAGTTATSTEAGRAATSDAPAAGTAAAAEAPAESTES |
| Small ribosomal subunit protein uS4 | D | 201 | Mycolicibacterium Smegmatis | MARYTGPATRKSRRLGVDLVGGDQSFEKRPYPPGQHGRARIKESEYRQQLQEKQKARFSYGVMEKQFRRYYEEANRQPGKTGDNLLRILESRLDNVVYRAGLARTRRMARQLVSHGHFLVNGVKVDIPSYRVSQYDIIDVKEKSLNTLPFQIARETAGERPIPSWLQVVGERQRILVHQLPERAQIDVPLTEQLIVELYSK |
| Small ribosomal subunit protein uS5 | E | 214 | Mycolicibacterium Smegmatis | MAEQAGAGSAQDNRGGRGRRDDRGGRGRDGGDKSNYIERVVSINRVSKVVKGGRRFSFTALVIVGDGKGMVGVGYGKAKEVPAAIAKGVEEARKNFFRVPLIGSTITHPVQGEAAAGVVMLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPIEDVAPAGMLKARRESEALAAAAAREGSA |
| Small ribosomal subunit protein bS6 | F | 96 | Mycolicibacterium Smegmatis | MRPYEIMVILDPTLDERTVAPSLETFLNVIRKDGGTVDKVDIWGRRRLAYEIAKHAEGIYAVIDVKAEPATVSELDRQLNLNESVLRTKVLRTDKH |
| Small ribosomal subunit protein uS7 | G | 156 | Mycolicibacterium Smegmatis | MPRKGPAPKRPLVNDPVYGSQLVTQLVNKVLLEGKKSLAERIVYGALEQAREKTGTDPVVTLKRALDNVKPALEVRSRRVGGATYQVPVEVRPDRSTTLALRWLVNFSRQRREKTMVERLANEILDASNGLGASVKRREDTHKMAEANRAFAHYRW |
| Small ribosomal subunit protein uS8 | H | 132 | Mycolicibacterium Smegmatis | MTMTDPIADFLTRLRNANSAYHDEVTLPHSKLKANIAEILKREGYISDYRTEDARVGKSLVVQLKYGPSRERSIAGLRRVSKPGLRVYAKSTNLPRVLGGLGVAIISTSSGLLTDRQAARQGVGGEVLAYVW |
| Small ribosomal subunit protein uS9 | I | 150 | Mycolicibacterium Smegmatis | MTDVTETEVVTESAEPREPVIIDRPIQTVGRRKEAVVRVRLVPGTGQFNLDGRTLENYFPNKVHQQLIKAPLVTVDRVDQFDIYAHLDGGGPSGQAGALRLAIARALILVQPEDRPALKKAGFLTRDPRAIERKKYGLKKARKAPQYSKR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2026-07-16 Deposition Author(s): Av-Gay, Y. , Ben-Zion, I. , Berger, M. , Bond, A. , Cook, M.A. , Corazza, M. , Dhar, N. , Ejim, L. , Fitzgerald, M. , Golas, A.J. , Gomez, J. , Guitor, A.K. , Hackenberger, D. , Hung, D.T. , Klepacki, D. , Mankin, A. , Morici, M. , Nandini, N. , Nietupski, R.M. , Rao, V.N. , Safdari, H.A. , Sahile, H. , Schaenzer, A.J. , Surette, M.G. , Tertigas, D. , Travin, D.T. , Vazquez Laslop, N. , Wang, L. , Wang, W. , Wilson, D.N. , Wright, G.D. , Xu, M. , Yarlagadda, V.