Crystal structure of dh511.12p fab in complex with hiv-1 gp41 mper peptide and phosphatidic acid (06:0 pa); single-lipid form
PDB DOI: 10.2210/pdb9zg9/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2025-12-02 Deposition Author(s): Cho, S.Y. , Wilson, I.A.
Crystal structure of dh511.12p fab in complex with hiv-1 gp41 mper peptide and phosphatidic acid (06:0 pa); single-lipid form
Primary Citation of Related Structures: 9ZG9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Antibody DH511.12P Fab heavy chain | A | 236 | Homo Sapiens , Synthetic Construct | QVQLVQSGGGLVKPGGSLTPSCVTSGFTFSNTWMSWVRQTPGKGLEWVARISRVGDGPIIDYAAPVKGRFIISRDDSRNTLFLHMNNLKTEDTAVYYCTADEGAPILRFFEWGYYNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD |
| Antibody DH511.12P Fab heavy chain | D | 236 | Homo Sapiens , Synthetic Construct | QVQLVQSGGGLVKPGGSLTPSCVTSGFTFSNTWMSWVRQTPGKGLEWVARISRVGDGPIIDYAAPVKGRFIISRDDSRNTLFLHMNNLKTEDTAVYYCTADEGAPILRFFEWGYYNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD |
| Antibody DH511.12P Fab light chain | B | 216 | Homo Sapiens , Synthetic Construct | VTDIRLTQSPSSLSASVGDRITITCRASQSIKDYLNWYKHRPGEAPKLLIYSASKLRSGVSSRFSGSGYGSAFTLTISSLQPEDFATYYCQESYSSVPMYIFGQGTKVDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC |
| Antibody DH511.12P Fab light chain | E | 216 | Homo Sapiens , Synthetic Construct | VTDIRLTQSPSSLSASVGDRITITCRASQSIKDYLNWYKHRPGEAPKLLIYSASKLRSGVSSRFSGSGYGSAFTLTISSLQPEDFATYYCQESYSSVPMYIFGQGTKVDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC |
| Transmembrane protein gp41 | C | 19 | Homo Sapiens , Synthetic Construct | KKKNWFDITNWLWYIRKKK |
| Transmembrane protein gp41 | F | 19 | Homo Sapiens , Synthetic Construct | KKKNWFDITNWLWYIRKKK |
Method: X-RAY DIFFRACTION
Deposited Date: 2025-12-02 Deposition Author(s): Cho, S.Y. , Wilson, I.A.