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FASTA Sequence PDB Format mmCIF Format
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9YZT

Isoreticular co-crystal 1 with asymmetrical expanded duplex (31mer) containing insert sequence taattaggccg and loaded with antennapedia homeodomain

PDB DOI: 10.2210/pdb9yzt/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Drosophila Melanogaster , Escherichia Coli , Synthetic Construct

Deposited: 2025-10-30
Deposition Author(s): Magna, E.N. , Shields, E.T. , Slaughter, C.K. , Snow, C.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.3 Å

Literature

Isoreticular co-crystal 1 with asymmetrical expanded duplex (31mer) containing insert sequence taattaggccg and loaded with antennapedia homeodomain

Magna, E.N. , Shields, E.T. , Slaughter, C.K. , Snow, C.D.

Primary Citation of Related Structures: 9YZT


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (31-MER) a 31 NA CCTGTGACAAATTGCCCTCATAATTAGGCCG
DNA (31-MER) b 31 NA GCGGCCTAATTATGAGGGCAATTTGTCACAG

Proteins
Molecule Chains Sequence Length Organism Sequence
Replication initiation protein C 263 Drosophila Melanogaster , Escherichia Coli , Synthetic Construct MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVFSFRDITSMTTG
Homeotic protein antennapedia D 62 Drosophila Melanogaster , Escherichia Coli , Synthetic Construct GTRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Homeotic protein antennapedia E 62 Drosophila Melanogaster , Escherichia Coli , Synthetic Construct GTRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-10-30
Deposition Author(s): Magna, E.N. , Shields, E.T. , Slaughter, C.K. , Snow, C.D.