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FASTA Sequence PDB Format mmCIF Format
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9YZL

Isoreticular co-crystal of replication initiator protein repe54 and asymmetrical expanded duplex (31mer) containing the cognate repe54 sequence, and additional t-a rich sequence with 5' terminal phosphates. two copies of even-skipped homeodomain loaded post-crystallization

PDB DOI: 10.2210/pdb9yzl/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Drosophila Melanogaster , Escherichia Coli , Synthetic Construct

Deposited: 2025-10-30
Deposition Author(s): Magna, E.N. , Shields, E.T. , Slaughter, C.K. , Snow, C.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.02 Å

Literature

Isoreticular co-crystal of replication initiator protein repe54 and asymmetrical expanded duplex (31mer) containing the cognate repe54 sequence, and additional t-a rich sequence with 5' terminal phosphates. two copies of even-skipped homeodomain loaded post-crystallization

Magna, E.N. , Shields, E.T. , Slaughter, C.K. , Snow, C.D.

Primary Citation of Related Structures: 9YZL


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (31-MER) a 31 NA CCTGTGACAAATTGCCCTCAGCTAATTAGGC
DNA (31-MER) b 31 NA GGCCTAATTAGCTGAGGGCAATTTGTCACAG

Proteins
Molecule Chains Sequence Length Organism Sequence
Replication initiation protein C 263 Drosophila Melanogaster , Escherichia Coli , Synthetic Construct MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVFSFRDITSMTTG
Segmentation protein even-skipped E 64 Drosophila Melanogaster , Escherichia Coli , Synthetic Construct GTGSVRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR
Segmentation protein even-skipped D 64 Drosophila Melanogaster , Escherichia Coli , Synthetic Construct GTGSVRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-10-30
Deposition Author(s): Magna, E.N. , Shields, E.T. , Slaughter, C.K. , Snow, C.D.