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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9YOL

Tra1 module of ctsaga

PDB DOI: 10.2210/pdb9yol/pdb

Classification: TRANSCRIPTION
Organism(s): Thermochaetoides Thermophila

Deposited: 2025-10-13
Deposition Author(s): Bushnell, D.A. , Chen, D.H. , Kornberg, R.D. , Mattoo, R.U.H. , Tamir, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.6 Å

9yol
Literature

Tra1 module of ctsaga

Bushnell, D.A. , Chen, D.H. , Kornberg, R.D. , Mattoo, R.U.H. , Tamir, S.

Primary Citation of Related Structures: 9YOL


Proteins
Molecule Chains Sequence Length Organism Sequence
SCA7 domain-containing protein Q 1273 Thermochaetoides Thermophila MDSRKDEEATIKVAPAKGTVLASKPHIWGKLKLKKPPVKQIKPGNWKEATLVEDKKKDKDGGAINAASPGPDVNQLDDRARDTFSNGRPLEDVLELLQCKLCRKGISRTAARDHIAKCLQIKKEKAQRKKEAREARERLKEAAREEEARRLEEEGAAKGDDDSDDDDGKEGAGKAGKKTKKTDVAGKKRKAEGELDKGKAKKKKDEPKPKVAKPKGPVDVERQCGVPLPNGQLCARSLTCKSHSMSAKRAVPGRSLPYDMLLAAYQKKNQAKQQKAALDANAPLEDEDDLNAGAVDSDEETAAVMSALANWNPQPVVPQPVFAPLKRQYQLARLHEQLQAATNGGRTNIFKVVGFGAQRLSDGHLGLYDAEDAPGEPDPVGLGSLSRRSSSIVAGEDDTTQQAQIAAVDHESQKEDAPLAEVCKKPCWKPKDRPGSVLDQEYVPMSGRSLSKVTKLKATGRAAANRQPKQSRRAASAIPESSKPLADAPVNTIVSKSSPALPTATPLYAFANLPTTDLRLQPAELAIQEMRKRLIAASSSSQSSISSTGVRAPRGRKRKEDRSMPGIHGSQPMENIHRATDGVRQTPENMAPTPKESPSDSTVEMRVLELGQLLAQEDSLAKSSPVLPNTPVVSLLGTSQNGATNGLKQGVQHIQRQMATKPTSVSRAISHSPMSSRPLFSAPSPPMMSHSLSPLTRAATPKALSSSPLVMSMLLPQQPPSHPFVSLPSGSTLSQAMQQSPIMTSMSKSGLTPAATRQPSPGVMPHSPPPRQGPGRPPKPRPADPVSPVNPTRSPNLPNASYLTTLGDLSTGMQPPQLPHMPQQQVPRVKLNQMRNQALASTFSPRPSYLPSQRLDPIREQAIKRAAERAAGLRMAQAQRQPQMQVHMNVQAQRTPQLQARTSPPTASPAETQGQMLSARAQAEDQGQNRLRMGQPQANTQLMRIDGPGMAAGMRQPIGNSQMDTMQPQRQVMNTPVVPAPQSSSPPSAERSSSQPQPVRDQIDSASVQAEAAQDETMNLDNDEMDDILREVKAQAEREAERQMAALSRTRPQAQQQAQNLRSTQNQSQMHALSPVASESSSPSLVMSASLPGLNEVNVRATVAAAAKKVAGSISPVANISSAATALSSPLDCRPYTTTSIPRPRLATTAPVPLMGATGPPAASGTTQNIGSFHVQQHRQRRQQQQLLQQHAQQHQQRLQQAAVHNNQQPFRFTYPAESMAAAVAIAGAHNLRPVVPLPPQAYLLSASQGGGRSGSRGSNIRNGSQARTQEQG
Spt20-like SEP domain-containing protein B 1192 Thermochaetoides Thermophila MAPTVTAAAPPVNPPSATKVKRPIPPGIQTNGVAPSRSSPSPSMAAKRAPSAVRQPSNPPSAGGTTPGATRPTIRIRRDPGPGPPLGRGQRSAGLRSASIATDPVTSPTFDAPPYVITPEYILKKFAGHPPSLIVHLYQNHFRFDQQEGMFQYKSPMRIFIEHLRNRTVPHEIMEYLIQGGVPFYEGCLIVQVFDHRTVNQTKEAAKPSSESSKTVPFSIHNHNPYITPSPYVPYPKEDTPADGSQTPASEKPSEDKDKENMPAPPVPADGQKAKGEPAKPTVYTVVLMPTAQALHTDLLLKTVTPRGASDSGGPPPTPHTAGPPPTPTAAGMPPPAKKQKRDHMELDPKNIYEVEAKILLATYPKLDLEPTKNAEETIAKLEKLAHPEHSHKPPEPKVRKRTVAEVAHDEALAAEQERYMLTLDERLSSKLAGAQAGANGADGDGQAPSASWEPRFERFKLIENIKQEHAEKKEQERIKQAEQERKLLQQKQEAAILQARQQQAEMERKRQEQIVLQQRQEAQRRLQQAQAAPVAQAQAQAQAQAQAQAQAQAQAQARAQARAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAAQAQAQAQAQAQAQAQAQAQAQAQAQAQQAATAATMGQTPHAHPMQPSPLPAGMTAGMPVSMAQQAQARFSQVSQPQQMSSPIVQQGTPQAASSPMPPMAAVAMQHSNSNMGQAGSPPRPPSVVQNHPMGVPMAPSMSARGSQQSHAAGTPRVPSATPNIPHATPITRPQVVPTPRMTQASPPAGVMTPTPQQMGQAMLMNNQGIAQMPNVNINSLAAAQQMAAQQRLIQQYQQQLQQSGMVPGNVQANMLQQQLAARQQMMIQQQLLAQQQQRAGQMMNPNIQAQLAAQYQQSLNNMQQQQLAQMNPMQAAHMRQLLAAQQAQRQGMMGVNVNVNGMTPQQLAVMQQQIQLQQQAQLIQQQQQQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQAAQQQPQPGMPGHPPQAAVAPTAPQVPIAQLQPPQNQLAALMMNPAVQNQIRNHSNALYSKNLPALAERFGGNAQNIPPEALAEFRQKCLNQAKVQVLSMLQQQQAGGRLAAGLPPQVQAAQVQAMQQQAQALAVAQAQVQAAQQAAAAQAAQQQGGMGQGM
Chains: C C 433 Thermochaetoides Thermophila MALSDNNPEEVDGMFLSNLRSDLELEEIWRMLQSGVTSPEDSQPTVSLDASSSGDKTMSSESQVALQDDADDELLVSILAGKVPLSELLANDNELLQSDGLSSAVCSADSDQEEDDNNDAGYGEEPDPRDVIANWFELCQMMYVSGETGEPSLETTGIIEDIVRQQVIEIIRHDAPKVSRLRTFLAWKDVRKNVKDSDDKGADADIAPGDDPVGAVVPGATVDDTARKTKKSRVGLPWEPASFYSVEVPEREDEEDEEEEEMNYITLQRLRKADERTKAMTKEEYVTWSEFRQASFTYRKGKRFREWAGFGLVTDSKPSDDIIDILGFLTFEMVQTLTEEALKIKEQEDLHRERTGENQSNANNPNGSANSSLSKKRKLTGGGGLFDPPNEGRTPVEPRHIQEAFRRLQQRPKKARAMLNGTKLQQRTQLKLF
Putative transcriptional coactivator HFI1 protein H 485 Thermochaetoides Thermophila MVDINPAALSRPSIGLSTPSFPGKSGSINVSVPSSASASASASSAHSKPQKTSLVPPRIDLEPIYTALKAAIGAEQWPVYKETLTNFLIGRLNQAELSERIDPILASQDGQKEHLHNQLIAAIYANVTREMPDPGLAPWVSANDKPTTAQTKPVTGDANERRLKGEVMQLPARDRRRIKELAHNDFDPYDALANVLMEHARAKPPKIAEPPASAGGLKMNFDLEIRKRYAQPLAVESGEFPDTSNIESRMLPFCYEAGLSSGHAPDAAQFMSIATETFIKEVMSAIFSRTRSNGPGDSGSAGFGLGSGWIQTHRYRKQLAKEEEAFQRGEISRDKMGLLPVEAKAASERGPLGMADVRLALEMGDCGLAGFPVIVKSVIYGWREGELENWEDYTYVDPSRPDGIAIPSRGDGDVEMGGVGVNGVVKGEPEPQQQPLANGVHDVDAMDIDGVSVAGGAANEIWWEGAEPETSDLLNAVLDSCLAVN
Transcription initiation factor TFIID subunit 12 I 770 Thermochaetoides Thermophila MNQTPAQGQGQGQPGQGMANRPPNAPSAANVAAPGGAPRQQGTPMYRPEMMRNIPLLSDEEKTKYERGLQQLWLMHDNTAPGSAENIEAKKKIAEFGRVLLTKLQQRRQQQQLQQQRQQQQQQQQQQQQQQQQQQQVQQQMQQQAQQPQTQPQQGQPQQQLQQAQVQQQVQQQQQIPQQQQQAPQQQQQQQQPQQLGQPGQQVQMMPQNQQPQVAQNVQPVAPTTVPQQQPAPATQTAPNQMGAPNSAAAQLRSLPAHIVSHVKDVTFLAPNNVVDKAGWIDQLKLQYAQKLFVMDSAGRQIKQIAASLADQSLPPEERKKLEEKKQTLEKQYNDAISFANTVRKQYMQKPAQNGAAVQNAANVARPQSAQGASAMTQPGAGVGNGTPVAAPVNPMQSSAAAINTAIETAKKQQMAAGRMAGAVNAMAAQVQSPATPVQAQVSPATQVHATQQSVPQQPQQIQQAQPTQQPQAQVKIEPGTAPHPAPLNTTMAGPTGVPSAAAPAQNAARMQTPTSATPTSANPNIRPLTHAAAMNLASQQRPGMPAVPTAASGAAPGTPMGIMGAAQQQQQQQPGHSHAHPPQPTQAPPPHSTNPKLPIPKVLHDKAIQMPQPVPNIGGAGSGRPTYTSGVMNQPALPKTPAFQLEGEGERVLNKKKLDELVRQVCGGTAEGQDGNMLTPEVEESVLNMADAFVDNVLHQACRNAKERGSKVLEIRDIQLVLERVYNIRIPGYASEELRTVRKVQPNSNWIKKMSAVQAAKVVPGKGDI
Non-specific serine/threonine protein kinase A 3893 Thermochaetoides Thermophila MATSLIEDVVKKLSVAETGTGNSLSERSLLVLPLMQVSCYTELKVKAEAACALRDSLDHYTAGPAYPAFLKKVMPVFIHILRQQPVFQTTGEQGHMQKLRNCILEILHRLPTSQTPPEHFEPYAHEIVDLLLELVRTDNEDNVILCVKILSDIMRHQHKIMSGKVQTFLNLIQELFEQLDKVVRDQLDNTSTTGPPGPPSTPGSTQSSFLPHQQSPRPGSPVTTGVTDFGADANQQANRLLPRGMYSFKVLAECPIIVVSIFQVHRSAVTPNVKAFVPLIKSALLCQAKAQDQAHREAAARGTIHIGVSPNIKNRAAFGDFITAQVKTMSFLAYLLRQYSSQLSDFLPHLPDIIVRLLRDCPRDKSSARKELFVAIRHIINFNFRKIFLPKIDELLDERTLVGDGLTVHETMRPLAYSMLADLIHHVRDQLSPEQIRKTVEVYTRNLQDNFPGTSFQTMSAKLLLNMAECIARLPNKVDARHYLIMILNAIADKFAAMNRQYPNAVKLSKQYAQQAAKNVPETYLADKENPPDWDEIDIFNATPIKISNPRDRAADPVVDNKFLFRNLMTGLKNTFYQLKSCNIPGAVDLTGAPAHWTDVAYGFTAEEVKVIAKLFREGAYVFRYYEIEKPAAESPYSSPVEYMANFYMVSSSKEEKELLETFATVFHCIDPATFHEVFQQEIPRLYEMIHEHTALLHIPQFFLASEATSPSFCGILLRFLMERIEDVGSADIKKSSILLRLFKLAFMAVTLFANQNEQVLLPHVVDIVTKSIELSTKAEEPMNYFLLLRSLFRSIGGGKFEHLYKQILPLLEMLLDVLNNLLMAARKPAERDLYVELCLTVPARLSNLLPHLSFLMRPLVVALRAGTELVGQGLRTLELCVDNLTADYLDPIMAPVIDELMTALFDHLKPHPYSHFHAHTTLRILGKLGGRNRKFMTEALPVTFQQYVDDRASFDLRLIGSKRDRAFPAHLGIDLAIQKLTEIPKPVKGGVPQLSRQYDPYYKRQALNLIIAQTKLRVGFDSVPEDLPRLVRLQVEDLVKKNRDVDISLFEVSDKERSIAKKNEEQALLKRLLKALLYAESIPEFKQEVDALLVNLARHFTLIEIGRSVIDMKKAYTPFDTKSGEGPLFIDNRVLSEAILESLANENLEVREAAKRLIKEMHNAAVTVFGSPMHVPRMTFWSSLASTFCHGCYEEEWFTKQGGALGIQTLLTEIDLGDLWVAAKQIEFVRALMYVVKDMPQDLPEKTRRTAQVTLEQLLARITRNAKKQDCLPPPPPPAPPGSHPPQPPPRPPRLAQLVMMLNSELAHMNRHVRATARRSIEAIAAAAQAEVWELLEPHKKHILGPIYAKPLRALPFAIQIGYIDAVTYYMSLKRDFVPFDENLNRLLMESLALADASDESLAGKTLEFRTHDFIVNLRVSCIKILSRAMSFEEFGSGSNNPTRPKVVSVFFKCLYSDSQPTIDAANDALKAVLQHTTKLPKDLLQSGLRPVLASLQDAKRLTVHSLDNLGRLLRLLTTYFKVEIGTRLLEHVKQIADPNFLQQLSFTFFEQNNAMKVIAAVFNIFHLLPDAARQFKERVIDNVLDLEQKLRRTHHSPFRLPLYKYLNKYPSDIWAFTLQKLEDLRYGRFLAQVLRHPDSQVLRDYGAANVEFIIKTCNTVVVSGKETKFIAIINTINMLDALCQFPTANSQSWLDNKEHIEWLKTVGKELELQQKKNSLTPNLRLPAHQASEQLMNILTKALDRNPNDLDALFSLVEGITSDDFRETPALLSHIYNKIIRSDSIDFWRITILRCLDIYSGKTASQRMKWYLLHNIVNPIIAMDVMRTWDDPNKASRLLDRTVIDSINTKIWKVNLPDPQEDLLQPRVDHTRMEVLQLSAMLVKYRHALLQDARKDFIKFAWTYIRLDDVINKHAAYVVIGYFIAHYETPAKIVSQIYFSLLKTNQNEGRALVTQALELMAPVMPKRCPFPPGDRNPVWALAPRRILAEESQNVQQMTAIFHYLVRHPDLFYDTRDKFAMLIIQCLRKVASPPNPSNDNRKLALNMMWLIWQWEQRRVESKLSEPLRAPSESPNSNKRKLDEQQGLSPSATRQAEFQIPSVGRHKMIRYLVEFIAQLNERYPLPSARPSDPPTTTSFLLPSPSNELCKKATALLYNLLQPQYWGDLVEEMDLFPNVTDLVLAGEKSATLLSADPSDPEKCDDKLITSIINTLQVVRIVLHFKSDRWILDNMPQIQKILEKCLKSANPEIQDCLHMADRKYDGDRDVKPTIKRILDAVPEDIPMEDADGDIEPESQTSELIAWLSGIATESMAAGNYVSGINILWSLGHRKPSIIDQHIPAIMRSLQSKLARDHVSHYAALGHQASGLRPQADPNAPTEMKAYDLEIQTNLILKAIEVTAMRMEILGDNRRPFLSVLATIVEKSLHIPLCEKILEMVEGWVFRSEGTWPTLKEKTAVLHKMISFEHRTDPTMLHKFLNLVLRIYEDPKITRTELTVRMEHAFLIGTRAQDVEMRNKFMSIFDKCLSKTASARLAYVILGQNWDTLADSYWLAQASQLLLGAVDMNPTIQLHQDDFRTLPISQLVAPYAKDSREPSVMIDDKFEAFMANHRRFLAELGDVRARDVLEPLMQLQHIDANFAHELWVALFPMFWSAVPKEDRPDLERGLVTLLTKDYHSRQMDKRPNVVQSLMAGAVKTWPHCKIPPHVLKFEAKTYDAWYTALHQLENAAIKPEIDSAAVRESNLDALVDLYSTLGEDDLFYGTWRRRCQFVETNAGLSYEQHGMWEKAQRMYESAQIKARTGVIPFSEAEYMLWEDHWVLCAQKLQQWEILQDFAKHENFQDLLLECAWRNTEYWQNQENRDQLDTVIKGVMDAPTPRRYFFQAFMSLLKLHNKQETPQDFNRVVDEAIQLSIRKWHQLPKRLTAAHVPLLQNFQQLVELHDASVICQSLAQTNASNLDVKSGELKLLLGSWRDRLPNMWDDIVAWQDLVTWRQHVFGLINATYLQLIPQQAQNAGGASFAYRGYHETAWIINRFAHVARKHALPEVCISQLSRIYTLPNIEIQEAFLKLREQAKCHYQNPDELTSGLDVINNTNLNYFSAPQKAEFYTLKGMFLEKLGQKEEADTAFGTALYFDITAAKAWAEWGYFNDRKFKENPSDLPSAKQALTSYLQAASSYKNHKSRKLIARILWLLSLDDANGTIAAGFDDFKGEIYVWWWIIFIPQLLVGLGYKEAPRVQAILLKIAKTYPQALYFLLRTNREDMLTIKKNQEAKERARQRAAQAAIPNKPNGSPQLTKKDGAAGAADGRPPTANGETPKPPEIKIEGAAPNAPTAATPQAAANAPQVPGAAPAEQQTGGVQKKPPWELTEEIMSVLKTAFPLLALSMETMVDQIQKHFKCPPDEDAYRLIVALLNDGLSYVSRMPASYAKDVKLPAATENNITRFAETILPNHIRPTFEADFVKVKPTMYEYIHNLRKWRDKFEEKLDRRASPAPLESFAHYSPHLSEFRYQKFDDVEIPGQYLQHKDKNQDFIRIDRFLPNVDLVRTIGASHRRLRIRGHDGSVHAFAVQHPAARHCRREERVLQLFRQLNQTLANKKESRRRDLQFTLPLMVPLAPHIRIVQEDTSYITLQSVYEDHCRRHGMNKDEPILFTMEKLRGLMDAKALQKPEQAVTAKLEVYRAIQEKFVDHTIVLEYFQGAYPNFADFWLFRRRFSYQLAALTFMTYTMHIDKRYPHKMNIARGSGNIWGSEAVSYMAPSRPLFQNTEPVPFRLTPNLQTLMGPLATEGIFAASVMAIARCLTEPEQHLEHALTLFVRDEMMFWFTNSHRTMSLTENQLRETVQANCDMIVKKALALAQTPQGNLPAHQTVTDLIAKATNPMNLALCDALWMPYL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-13
Deposition Author(s): Bushnell, D.A. , Chen, D.H. , Kornberg, R.D. , Mattoo, R.U.H. , Tamir, S.