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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9YIF

Nn39-171 fab in complex with hiv-1 env 5mut-3fill sosip

PDB DOI: 10.2210/pdb9yif/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2025-10-01
Deposition Author(s): Bjorkman, P.J. , Gavor, E. , Gristick, H.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

9yif
Literature

Nn39-171 fab in complex with hiv-1 env 5mut-3fill sosip

Bjorkman, P.J. , Gavor, E. , Gristick, H.B.

Primary Citation of Related Structures: 9YIF


Proteins
Molecule Chains Sequence Length Organism Sequence
Transmembrane protein gp41 A 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 B 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 C 153 Human Immunodeficiency Virus 1 , Macaca Mulatta AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp120 E 479 Human Immunodeficiency Virus 1 , Macaca Mulatta NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp120 F 479 Human Immunodeficiency Virus 1 , Macaca Mulatta NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp120 G 479 Human Immunodeficiency Virus 1 , Macaca Mulatta NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
NN39-171 Fab heavy chain H 128 Human Immunodeficiency Virus 1 , Macaca Mulatta EVQLVESGGGLAKPGGSLKLSCAASGFSFRDHYMDWVRQAPGKGLEWVSRISNGGRVTWYADSVKGRFSISRDNARNTLFLQMNSLRPEDTAVYFCARGRRVGPYDLNYYLTDSFDYWGQGVLVIVSS
NN39-171 Fab heavy chain J 128 Human Immunodeficiency Virus 1 , Macaca Mulatta EVQLVESGGGLAKPGGSLKLSCAASGFSFRDHYMDWVRQAPGKGLEWVSRISNGGRVTWYADSVKGRFSISRDNARNTLFLQMNSLRPEDTAVYFCARGRRVGPYDLNYYLTDSFDYWGQGVLVIVSS
NN39-171 Fab heavy chain M 128 Human Immunodeficiency Virus 1 , Macaca Mulatta EVQLVESGGGLAKPGGSLKLSCAASGFSFRDHYMDWVRQAPGKGLEWVSRISNGGRVTWYADSVKGRFSISRDNARNTLFLQMNSLRPEDTAVYFCARGRRVGPYDLNYYLTDSFDYWGQGVLVIVSS
NN39-171 Fab light chain K 107 Human Immunodeficiency Virus 1 , Macaca Mulatta EIVMTQSPATLSLSPGDRATLSCRASQSVSRDLAWYQKKPGQAPRLLMYDAFSRATGIPDRFSGSGSGTDFALTINSLEAEDFALYYCQQFSKWPPGFGQGTKVEIK
NN39-171 Fab light chain L 107 Human Immunodeficiency Virus 1 , Macaca Mulatta EIVMTQSPATLSLSPGDRATLSCRASQSVSRDLAWYQKKPGQAPRLLMYDAFSRATGIPDRFSGSGSGTDFALTINSLEAEDFALYYCQQFSKWPPGFGQGTKVEIK
NN39-171 Fab light chain N 107 Human Immunodeficiency Virus 1 , Macaca Mulatta EIVMTQSPATLSLSPGDRATLSCRASQSVSRDLAWYQKKPGQAPRLLMYDAFSRATGIPDRFSGSGSGTDFALTINSLEAEDFALYYCQQFSKWPPGFGQGTKVEIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-01
Deposition Author(s): Bjorkman, P.J. , Gavor, E. , Gristick, H.B.