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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9YIB

Am12-351 fab in complex with hiv-1 env 5mut-3fill sosip

PDB DOI: 10.2210/pdb9yib/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1

Deposited: 2025-10-01
Deposition Author(s): Bjorkman, P.J. , Gavor, E. , Gristick, H.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.3 Å

9yib
Literature

Am12-351 fab in complex with hiv-1 env 5mut-3fill sosip

Bjorkman, P.J. , Gavor, E. , Gristick, H.B.

Primary Citation of Related Structures: 9YIB


Proteins
Molecule Chains Sequence Length Organism Sequence
Transmembrane protein gp41 C 153 Human Immunodeficiency Virus 1 AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 B 153 Human Immunodeficiency Virus 1 AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Transmembrane protein gp41 A 153 Human Immunodeficiency Virus 1 AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp160 G 479 Human Immunodeficiency Virus 1 NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp160 F 479 Human Immunodeficiency Virus 1 NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Envelope glycoprotein gp160 E 479 Human Immunodeficiency Virus 1 NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
AM12-351 Fab heavy chain H 130 Human Immunodeficiency Virus 1 QVQLQQWGEGLMKPSETLSLTCAIYGVSIRDYYWSWIRQPPGKGLEWIGIVDTVDSDDASPQYTPSLRNRVVISTDTSKNQFSLKLRSVTAADTALYFCARAGALRYYGTWNRERRFDVWGPGVLVTVSS
AM12-351 Fab heavy chain J 130 Human Immunodeficiency Virus 1 QVQLQQWGEGLMKPSETLSLTCAIYGVSIRDYYWSWIRQPPGKGLEWIGIVDTVDSDDASPQYTPSLRNRVVISTDTSKNQFSLKLRSVTAADTALYFCARAGALRYYGTWNRERRFDVWGPGVLVTVSS
AM12-351 Fab heavy chain M 130 Human Immunodeficiency Virus 1 QVQLQQWGEGLMKPSETLSLTCAIYGVSIRDYYWSWIRQPPGKGLEWIGIVDTVDSDDASPQYTPSLRNRVVISTDTSKNQFSLKLRSVTAADTALYFCARAGALRYYGTWNRERRFDVWGPGVLVTVSS
AM12-351 Fab light chain L 112 Human Immunodeficiency Virus 1 DVVMTQSPLSLPITPGQPASISCRSSHSLVDSDGNTFLSWYHQKPGQPPRLLIYKVSNRDSGVPDRFSGTGAGTDFTLKISRVEAEDVGIFSCGQGTHWPWTFGQGTKVEIK
AM12-351 Fab light chain K 112 Human Immunodeficiency Virus 1 DVVMTQSPLSLPITPGQPASISCRSSHSLVDSDGNTFLSWYHQKPGQPPRLLIYKVSNRDSGVPDRFSGTGAGTDFTLKISRVEAEDVGIFSCGQGTHWPWTFGQGTKVEIK
AM12-351 Fab light chain N 112 Human Immunodeficiency Virus 1 DVVMTQSPLSLPITPGQPASISCRSSHSLVDSDGNTFLSWYHQKPGQPPRLLIYKVSNRDSGVPDRFSGTGAGTDFTLKISRVEAEDVGIFSCGQGTHWPWTFGQGTKVEIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-01
Deposition Author(s): Bjorkman, P.J. , Gavor, E. , Gristick, H.B.