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9YHU

Dna ligase 1 e346a/e592a in complex with nick containing 3'-8oxorg:a captured at post-catalytic stage

PDB DOI: 10.2210/pdb9yhu/pdb

Classification: LIGASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2025-10-01
Deposition Author(s): Caglayan, M. , Kanalelamparithi, B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.96 Å

9yhu
Literature

Dna ligase 1 e346a/e592a in complex with nick containing 3'-8oxorg:a captured at post-catalytic stage

Caglayan, M. , Kanalelamparithi, B.

Primary Citation of Related Structures: 9YHU


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA ligase 1 A 668 Homo Sapiens , Synthetic Construct DPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLALGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQADNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPEDTAAALEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*(8GM)P*GP*TP*CP*GP*GP*AP*C)-3') b 18 NA GCTGATGCGTXGTCGGAC
DNA (5'-D(P*GP*TP*CP*CP*GP*AP*CP*AP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') c 18 NA GTCCGACAACGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-10-01
Deposition Author(s): Caglayan, M. , Kanalelamparithi, B.