Am12-347 fab in complex with hiv-1 env 5mut-3fill sosip
PDB DOI: 10.2210/pdb9yht/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta
Deposited: 2025-09-30 Deposition Author(s): Bjorkman, P.J. , Gavor, E. , Gristick, H.B.
Am12-347 fab in complex with hiv-1 env 5mut-3fill sosip
Bjorkman, P.J. , Gavor, E. , Gristick, H.B.
Primary Citation of Related Structures: 9YHT
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Transmembrane protein gp41 | C | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Transmembrane protein gp41 | B | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Transmembrane protein gp41 | A | 153 | Human Immunodeficiency Virus 1 , Macaca Mulatta | AVGIGAVSLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEPQQHLLKDTHWGIKQLQARVLAVEHYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD |
| Envelope glycoprotein gp120 | G | 479 | Human Immunodeficiency Virus 1 , Macaca Mulatta | NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
| Envelope glycoprotein gp120 | F | 479 | Human Immunodeficiency Virus 1 , Macaca Mulatta | NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
| Envelope glycoprotein gp120 | E | 479 | Human Immunodeficiency Virus 1 , Macaca Mulatta | NLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLQCTNYTPNLTNDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKNKTFNGTGPCPNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVIIRSENITNNAKNILVQLNTPVQINCTRPNNNTVKSIRIGPGQAFYYTGDIIGDIRQAHCNVSKATWNETLGNVSKQLRKHFGNNTIIRFAQSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR |
| AM12-347 Fab heavy chain | H | 130 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QVQLQQWGEGLVKPSETLSLTCAIYGCSIRDYYWAWIRQAPGRGLEWIGIIDTVDSDDASPSYSPSLKNRVVISTDTSKNQFSLKVRSLTAADTAVYYCARAGPLRYYGTWNRQRRFDVWGPGVLVSVSS |
| AM12-347 Fab heavy chain | J | 130 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QVQLQQWGEGLVKPSETLSLTCAIYGCSIRDYYWAWIRQAPGRGLEWIGIIDTVDSDDASPSYSPSLKNRVVISTDTSKNQFSLKVRSLTAADTAVYYCARAGPLRYYGTWNRQRRFDVWGPGVLVSVSS |
| AM12-347 Fab heavy chain | M | 130 | Human Immunodeficiency Virus 1 , Macaca Mulatta | QVQLQQWGEGLVKPSETLSLTCAIYGCSIRDYYWAWIRQAPGRGLEWIGIIDTVDSDDASPSYSPSLKNRVVISTDTSKNQFSLKVRSLTAADTAVYYCARAGPLRYYGTWNRQRRFDVWGPGVLVSVSS |
| AM12-347 Fab light chain | L | 112 | Human Immunodeficiency Virus 1 , Macaca Mulatta | DVVMTQSPLSLPITPGQPASISCRSSHSLVHSDGNTYLSWYHQKPGQPPRLLIYKVSNRDSGVPDRFSGSGAGTDFTLKISRVEAEDVGIFYCGQGTHWPWTFGQGTKVEIK |
| AM12-347 Fab light chain | K | 112 | Human Immunodeficiency Virus 1 , Macaca Mulatta | DVVMTQSPLSLPITPGQPASISCRSSHSLVHSDGNTYLSWYHQKPGQPPRLLIYKVSNRDSGVPDRFSGSGAGTDFTLKISRVEAEDVGIFYCGQGTHWPWTFGQGTKVEIK |
| AM12-347 Fab light chain | N | 112 | Human Immunodeficiency Virus 1 , Macaca Mulatta | DVVMTQSPLSLPITPGQPASISCRSSHSLVHSDGNTYLSWYHQKPGQPPRLLIYKVSNRDSGVPDRFSGSGAGTDFTLKISRVEAEDVGIFYCGQGTHWPWTFGQGTKVEIK |
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-09-30 Deposition Author(s): Bjorkman, P.J. , Gavor, E. , Gristick, H.B.