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FASTA Sequence PDB Format mmCIF Format
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9Y90

Cryo-em structure of broadly neutralizing antibody vrc48.02 in complex with hiv-1 env bg505 ds-sosip trimer

PDB DOI: 10.2210/pdb9y90/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2025-09-12
Deposition Author(s): Gorman, J. , Kwong, P.D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.43 Å

9y90
Literature

Cryo-em structure of broadly neutralizing antibody vrc48.02 in complex with hiv-1 env bg505 ds-sosip trimer

Gorman, J. , Kwong, P.D.

Primary Citation of Related Structures: 9Y90


Proteins
Molecule Chains Sequence Length Organism Sequence
VRC48.02 Heavy F 124 Homo Sapiens , Human Immunodeficiency Virus 1 QAEMVQSGPEVKKPGASVTVSCRASDYTFTDYLVHWVRQAPGQGLEWMGWMKPRRGNVNYAHGFQGRITLTRDTSSGTAYMRLTGLRSDDTAVYFCVRDRIDYYGQTHWYFDLWGRGTLVTVSS
VRC48.02 Heavy A 124 Homo Sapiens , Human Immunodeficiency Virus 1 QAEMVQSGPEVKKPGASVTVSCRASDYTFTDYLVHWVRQAPGQGLEWMGWMKPRRGNVNYAHGFQGRITLTRDTSSGTAYMRLTGLRSDDTAVYFCVRDRIDYYGQTHWYFDLWGRGTLVTVSS
VRC48.02 Heavy E 124 Homo Sapiens , Human Immunodeficiency Virus 1 QAEMVQSGPEVKKPGASVTVSCRASDYTFTDYLVHWVRQAPGQGLEWMGWMKPRRGNVNYAHGFQGRITLTRDTSSGTAYMRLTGLRSDDTAVYFCVRDRIDYYGQTHWYFDLWGRGTLVTVSS
VRC48.02 Light I 106 Homo Sapiens , Human Immunodeficiency Virus 1 FNPMTQSPSSLSASVGDRVTITCRASQFANDEVAWFQQKAGRAPKLLIFKASKLERGVPSRFSGSGFGTEFTLTITNVQPDDFATYFCQHLEAFGRGTKVDMKRTV
VRC48.02 Light B 106 Homo Sapiens , Human Immunodeficiency Virus 1 FNPMTQSPSSLSASVGDRVTITCRASQFANDEVAWFQQKAGRAPKLLIFKASKLERGVPSRFSGSGFGTEFTLTITNVQPDDFATYFCQHLEAFGRGTKVDMKRTV
VRC48.02 Light G 106 Homo Sapiens , Human Immunodeficiency Virus 1 FNPMTQSPSSLSASVGDRVTITCRASQFANDEVAWFQQKAGRAPKLLIFKASKLERGVPSRFSGSGFGTEFTLTITNVQPDDFATYFCQHLEAFGRGTKVDMKRTV
BG505 SOSIP.664 gp41 J 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
BG505 SOSIP.664 gp41 C 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
BG505 SOSIP.664 gp41 H 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
HIV-1 BG505 DS-SOSIP gp120 K 481 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 BG505 DS-SOSIP gp120 D 481 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 BG505 DS-SOSIP gp120 L 481 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-09-12
Deposition Author(s): Gorman, J. , Kwong, P.D.