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9XGO

Omicron-specific ultra-potent sars-cov-2 neutralizing antibodies targeting the n1/n2 loop of spike n-terminal domain

PDB DOI: 10.2210/pdb9xgo/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2025-10-30
Deposition Author(s): Li, Z.Q. , Niu, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.77 Å

9xgo
Literature

Omicron-specific ultra-potent sars-cov-2 neutralizing antibodies targeting the n1/n2 loop of spike n-terminal domain

Li, Z.Q. , Niu, X.

Primary Citation of Related Structures: 9XGO


Proteins
Molecule Chains Sequence Length Organism Sequence
BD58-0730 heavy chain H 121 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 VQLVQSGAEVKKPGASVKVSCKASGYTFTSYYMHWVRQAPGQGLEWMGIINPSGGSTSNAQKFQGRVTMTRDTFTSTVYMELSSLRSEDTAVYYCARDIARGIGEYYFDYWGQGTLVTVSS
BD58-0730 light chain L 112 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QSALTQTASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVYKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTTSSTLLFGGGTKLTVLGQ
Spike protein S1 N 285 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 CVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPALPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDVYQKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKEGNFKNLREFVFKNIDGYFKIYSKHTPINLERDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTL
Spike glycoprotein R 223 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TESIVRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-30
Deposition Author(s): Li, Z.Q. , Niu, X.