9WQV
Cryo-em structure of lh1-rc from rhodovulum sulfidophilum
PDB DOI: 10.2210/pdb9wqv/pdb
Classification: PHOTOSYNTHESIS Organism(s): Rhodovulum Sulfidophilum Dsm 1374
Deposited: 2025-09-11 Deposition Author(s): Wang, G.-L. , Yu, L.-J. , Yue, X.-Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 1.81 Å
Cryo-em structure of lh1-rc from rhodovulum sulfidophilum
Wang, G.-L. , Yu, L.-J. , Yue, X.-Y.
Primary Citation of Related Structures: 9WQV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Antenna pigment protein beta chain | 0 | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | 2 | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | 4 | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | 6 | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | 8 | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | B | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | E | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | G | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | J | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | N | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | P | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | R | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | T | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | V | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | X | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein beta chain | Z | 48 | Rhodovulum Sulfidophilum Dsm 1374 | MAESDVSFTGLTDEQAQEIHAVYMSGLWLFSAVAVLAHLAVYIWRPWL |
| Antenna pigment protein alpha chain | 1 | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | 3 | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | 5 | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | 7 | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | 9 | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| NADH:ubiquinone oxidoreductase 41 kd complex i subunit | A | 229 | Rhodovulum Sulfidophilum Dsm 1374 | MNISRTEARFKFAIFWWLVAALCGLTVATIGYGVGLWALGAFVGGFGTFVVAGVVLTWAFCHTDAEFSAMVAKKREAMAAMKPYRDANAAIVVPNRPKPGGPKVAPTVPRSTPKAAAAPAARVAPKADAAETSSPKPEAAPTAAQEKVGNGPAALSAPRAGGADDLKKIKGVGPKLEKQVNDLGIYHYDQIASWTAADVAWMDENLEGFKGRVSRDDWVAQARALAKEG |
| Antenna pigment protein alpha chain | D | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | F | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | I | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | K | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | O | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | Q | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | S | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | U | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | W | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Antenna pigment protein alpha chain | Y | 54 | Rhodovulum Sulfidophilum Dsm 1374 | MAKFYKIWMIFDPRRVLVAQGVFLFLLAVMIHLVLLSTDYFNWLTIAAEKAAGA |
| Photosynthetic reaction center cytochrome c subunit | C | 356 | Rhodovulum Sulfidophilum Dsm 1374 | MMLKFPKWFFKWSEENPTDLMGPGILVGTVGGAVAVAAIIVAFGNPNATIDHQTGPRGIGMAVSKFVKDNPQFDVYEAEYQVFDRVEAPEGTPTAAEAYGDSVVAFGDMDQANFDQLTKAMSAWVGMDVVLYDDGEVDETTLAITKNCIEATQYLNDSWDTHNLATEGKGVNCYTCHRGQPTPPGSWMKSGNVNSAMEGWSGVQNRLLVGRKYTDSQYTSLPVDALEKLLLDGDSIKVTDTESRVDQQKGDPTWQDAERTFSLMNHQANSLNVGCVYCHNTRAFYDPTQVTPQWSVTTLAQQMSIDINQTFYEPRSEILGHESAKVDCMTCHMGVISPLNGHDMVAEWPELAAPAE |
| photosynthetic reaction center subunit H | H | 260 | Rhodovulum Sulfidophilum Dsm 1374 | MVNAFFGNFDIASLAIWSFWLFFAGLIFYLQRMNMHEGYPLEDEVGNAAPNQGMFPLPAAKTFKLPHGQGEKTVPDMQTDPRNADLALQKVTKSNGYPLEPTGDPMVDGVGPAAWCARKDEPELDGRGHPKIQPLSVLKTFKVSAGRDPRGMPVIAGDGEAVGTIVDMWVDEPEQLVRYLELELDEAHGGGRRLLPMQLAKIGWFKPEVSVHSIYGKHFAAVPTIKSAKQITKLEEDKVCAYYAGGKLYADPAERLEPQF |
| Reaction center protein L chain | L | 284 | Rhodovulum Sulfidophilum Dsm 1374 | MALLSFERKYRVRGGTLIGGDLFDFWVGPFFVGFFGVTTIFFATLGTAMIFWGAALQGTFNPLKIHIAPPDLSYGLSIAPLAEGGLWQFITLCAIGAFVSWALREVEICRKLGIGYHIPIAFGMAIFAYLTLEVFRPMLMGAWGHAFPYGIFTHLDWVSNTGYHYLHFHYNPFHMLGVSLFFATCLALALHGGLILSACNPEKGEEAKTPDHEDSFFRDLIGYSIGTLGIHRAGWLLAINAVFFSAVCIIISGPLWTEGWPEWWTWWSNLPIWPEAIPAVQGSM |
| Reaction center protein M chain | M | 321 | Rhodovulum Sulfidophilum Dsm 1374 | MAEYQNIFTQVQVQGPSDWGMDNENNMMEERAGMGHFSILGWLGNAQLGPIYLGYTGVVSLIAGCFAFLIIGLNMLAQVDWSLVQLLRQGFWLALEPPSPEYGLRIPPLKEGGWYMVASFFLLISVWAWWARTYMLAVEHKMGKHIAWAFLSAIWLFMVLGFFRPILMGSWSEMVPYGIFPHLDWTTAFSIRYGNLYYNPFHALSIAFLYGSALLFAMHGGTILAVTRFGGDRELEQIYDRGTASERAALFWRWTMGFNATMEGIHRWAWWFAVLTPLTGGIGILLTGTVVDNWYIWAQEHNFVTEYTQPYGVDAYVGQGG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-09-11 Deposition Author(s): Wang, G.-L. , Yu, L.-J. , Yue, X.-Y.