Crystal structure of sn45 tcr in complex with c14-gly-gly-ser-ile lipopeptide-bound mamu-b*05104
PDB DOI: 10.2210/pdb9wnt/pdb
Classification: IMMUNE SYSTEM Organism(s): Macaca Mulatta , Synthetic Construct
Deposited: 2025-09-05 Deposition Author(s): Morita, D. , Sugita, M.
Crystal structure of sn45 tcr in complex with c14-gly-gly-ser-ile lipopeptide-bound mamu-b*05104
Primary Citation of Related Structures: 9WNT
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| MHC class I antigen | A | 276 | Macaca Mulatta , Synthetic Construct | GSHSLRYFGTAVSRPGRGEPRFIYVGYVDDTQFVRFDSDAASPRTEPRAPWVEQEGPEYWEEETRRAKARAQTDRADLRTLRGYYNQSEAGSHTLQWMAGCDLGPNGRLLRGYHQSAYDGKDYIALNEDLRSWIAADMAAQNTQRKWEATRYAERFRAYLEGPCLEWLRRYLENGKETLQHADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEEQTQDIEFVETRPAGDGTFQKWGAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEP |
| MHC class I antigen | F | 276 | Macaca Mulatta , Synthetic Construct | GSHSLRYFGTAVSRPGRGEPRFIYVGYVDDTQFVRFDSDAASPRTEPRAPWVEQEGPEYWEEETRRAKARAQTDRADLRTLRGYYNQSEAGSHTLQWMAGCDLGPNGRLLRGYHQSAYDGKDYIALNEDLRSWIAADMAAQNTQRKWEATRYAERFRAYLEGPCLEWLRRYLENGKETLQHADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEEQTQDIEFVETRPAGDGTFQKWGAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEP |
| Beta-2-microglobulin | B | 100 | Macaca Mulatta , Synthetic Construct | AIQRTPKIQVYSRHPPENGKPNFLNCYVSGFHPSDIEVDLLKNGEKMGKVEHSDLSFSKDWSFYLLYYTEFTPNEKDEYACRVNHVTLSGPRTVKWDRDM |
| Beta-2-microglobulin | G | 100 | Macaca Mulatta , Synthetic Construct | AIQRTPKIQVYSRHPPENGKPNFLNCYVSGFHPSDIEVDLLKNGEKMGKVEHSDLSFSKDWSFYLLYYTEFTPNEKDEYACRVNHVTLSGPRTVKWDRDM |
| 4-mer Lipopeptide | C | 4 | Macaca Mulatta , Synthetic Construct | GGSI |
| 4-mer Lipopeptide | H | 4 | Macaca Mulatta , Synthetic Construct | GGSI |
| SN45 T cell receptor alpha chain | D | 197 | Macaca Mulatta , Synthetic Construct | AKTTQPISMDSYEGQEVNITCNHNDIATSDYIMWYQQFPNQGPRFIIQGYKANIANEVASLFIPTDRKSSTLSLPRVALSDTAVYYCLVGGGGYVLTFGRGTSLIVHPYIQNPDPAVYQLRGSKSNDTSVCLFTDFDSVMNVSQSKDSDVHITDKCVLDMRSMDFKSNGAVAWSNKSDFACTSAFKDSVIPADTFFP |
| SN45 T cell receptor alpha chain | I | 197 | Macaca Mulatta , Synthetic Construct | AKTTQPISMDSYEGQEVNITCNHNDIATSDYIMWYQQFPNQGPRFIIQGYKANIANEVASLFIPTDRKSSTLSLPRVALSDTAVYYCLVGGGGYVLTFGRGTSLIVHPYIQNPDPAVYQLRGSKSNDTSVCLFTDFDSVMNVSQSKDSDVHITDKCVLDMRSMDFKSNGAVAWSNKSDFACTSAFKDSVIPADTFFP |
| SN45 T cell receptor beta chain | E | 245 | Macaca Mulatta , Synthetic Construct | DTAVSQTPKYLVRQTGKNESLKCEQNLGHNAMYWYKQDSKKLLKIMFIYNNKEPILNETVPYRFSPKSPDKAHLNLHIKSLELGDSAVYFCASSQDLGAGEVYEQYFGPGTRLTVIEDLKKVFPPKVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALEDSRYCLSSRLRVSATFWHNPRNHFRCQVQFYGLSEDDEWTEDRDKPITQKISAEAWGRA |
| SN45 T cell receptor beta chain | J | 245 | Macaca Mulatta , Synthetic Construct | DTAVSQTPKYLVRQTGKNESLKCEQNLGHNAMYWYKQDSKKLLKIMFIYNNKEPILNETVPYRFSPKSPDKAHLNLHIKSLELGDSAVYFCASSQDLGAGEVYEQYFGPGTRLTVIEDLKKVFPPKVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALEDSRYCLSSRLRVSATFWHNPRNHFRCQVQFYGLSEDDEWTEDRDKPITQKISAEAWGRA |
Method: X-RAY DIFFRACTION
Deposited Date: 2025-09-05 Deposition Author(s): Morita, D. , Sugita, M.