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FASTA Sequence PDB Format mmCIF Format
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9W3W

Structure of csm6 from actinomyces procaprae in complex with cyclic penta-adenylate

PDB DOI: 10.2210/pdb9w3w/pdb

Classification: IMMUNE SYSTEM/RNA
Organism(s): Actinomyces Procaprae , Synthetic Construct

Deposited: 2025-07-30
Deposition Author(s): Gao, H. , Lin, Z. , Liu, Y. , Shi, R. , Yang, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.67 Å

9w3w
Literature

Structure of csm6 from actinomyces procaprae in complex with cyclic penta-adenylate

Gao, H. , Lin, Z. , Liu, Y. , Shi, R. , Yang, M.

Primary Citation of Related Structures: 9W3W


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*AP*AP*AP*AP*A)-3') 1 5 NA AAAAA
RNA (5'-R(P*AP*AP*AP*AP*A)-3') 2 5 NA AAAAA
RNA (5'-R(P*AP*AP*AP*AP*A)-3') 3 5 NA AAAAA
RNA (5'-R(P*AP*AP*AP*AP*A)-3') 4 5 NA AAAAA

Proteins
Molecule Chains Sequence Length Organism Sequence
Csm6 A 797 Actinomyces Procaprae , Synthetic Construct MTVLVHIVGEGDLGSDILKLKGEQRKQARHAGVTALRTAAVGGTASTPAEAVGLLLDGAASRDHKSRFARTPLALELGAIQAECRSGQVHVLLLGSNSGDGATADIAEALAALLACDEVRAVLHEQYGLEVTAELRADGNLNEQVGRGDLSSWVESAYGTAADRPVVVSMIGGATMMCLSAMGVVDQLGYDWRLAVAGSPDDDAARLVRRGHHGDAPFYWLRALGYLEQAAAWAQEHDREELIDGEHSRLQGDIDAVFGSAGRDDVSSSVTDEQLASLVAVEMARADNGAGLAVRAWVEKHYEALLAEENADRGQDDQISSVFKRLPGKELGKVLGMVRDEQLDQHSASAAWLLKTGDRLRPVGNRAVADAAAPTASELATIKNVPELWRRVPSWMHWPGQGRVLYICGIGAGYRPPSVIERVMEAGPGQELKRAVPGGMLEGGGVGEVDFLLLHSADPGSKRTAVKTCASVLLTTPKDGMIASGVDIIDYGGVSRDQFLAVEETSRKVAGIVREVLETKRPSAVAVVGLGQKGAVIGALEAAQAWCAGHAVPLFVETSVQPGQNIKQPGMQFHRIALHNDAEAALRAAAAASLSSLNLLSAVRVLSAGDRDMDVQAQECDKLREEYLEAVNTKDPDAYAGVLLSVMETIHKLCQEAEGDVDPRLVVVVAEAVNFPRRGKKVAETLFRERYAWQGKENGYSAEWSEVDACGRGDLLRLLYEVRNEVRLTHGDSSVDEAVRAVMRNRFIRISDDFGYEGLLKRAIASVKGGAENLGIDVDDSWAERFQALRGWAEGRS
Csm6 B 797 Actinomyces Procaprae , Synthetic Construct MTVLVHIVGEGDLGSDILKLKGEQRKQARHAGVTALRTAAVGGTASTPAEAVGLLLDGAASRDHKSRFARTPLALELGAIQAECRSGQVHVLLLGSNSGDGATADIAEALAALLACDEVRAVLHEQYGLEVTAELRADGNLNEQVGRGDLSSWVESAYGTAADRPVVVSMIGGATMMCLSAMGVVDQLGYDWRLAVAGSPDDDAARLVRRGHHGDAPFYWLRALGYLEQAAAWAQEHDREELIDGEHSRLQGDIDAVFGSAGRDDVSSSVTDEQLASLVAVEMARADNGAGLAVRAWVEKHYEALLAEENADRGQDDQISSVFKRLPGKELGKVLGMVRDEQLDQHSASAAWLLKTGDRLRPVGNRAVADAAAPTASELATIKNVPELWRRVPSWMHWPGQGRVLYICGIGAGYRPPSVIERVMEAGPGQELKRAVPGGMLEGGGVGEVDFLLLHSADPGSKRTAVKTCASVLLTTPKDGMIASGVDIIDYGGVSRDQFLAVEETSRKVAGIVREVLETKRPSAVAVVGLGQKGAVIGALEAAQAWCAGHAVPLFVETSVQPGQNIKQPGMQFHRIALHNDAEAALRAAAAASLSSLNLLSAVRVLSAGDRDMDVQAQECDKLREEYLEAVNTKDPDAYAGVLLSVMETIHKLCQEAEGDVDPRLVVVVAEAVNFPRRGKKVAETLFRERYAWQGKENGYSAEWSEVDACGRGDLLRLLYEVRNEVRLTHGDSSVDEAVRAVMRNRFIRISDDFGYEGLLKRAIASVKGGAENLGIDVDDSWAERFQALRGWAEGRS
Csm6 C 797 Actinomyces Procaprae , Synthetic Construct MTVLVHIVGEGDLGSDILKLKGEQRKQARHAGVTALRTAAVGGTASTPAEAVGLLLDGAASRDHKSRFARTPLALELGAIQAECRSGQVHVLLLGSNSGDGATADIAEALAALLACDEVRAVLHEQYGLEVTAELRADGNLNEQVGRGDLSSWVESAYGTAADRPVVVSMIGGATMMCLSAMGVVDQLGYDWRLAVAGSPDDDAARLVRRGHHGDAPFYWLRALGYLEQAAAWAQEHDREELIDGEHSRLQGDIDAVFGSAGRDDVSSSVTDEQLASLVAVEMARADNGAGLAVRAWVEKHYEALLAEENADRGQDDQISSVFKRLPGKELGKVLGMVRDEQLDQHSASAAWLLKTGDRLRPVGNRAVADAAAPTASELATIKNVPELWRRVPSWMHWPGQGRVLYICGIGAGYRPPSVIERVMEAGPGQELKRAVPGGMLEGGGVGEVDFLLLHSADPGSKRTAVKTCASVLLTTPKDGMIASGVDIIDYGGVSRDQFLAVEETSRKVAGIVREVLETKRPSAVAVVGLGQKGAVIGALEAAQAWCAGHAVPLFVETSVQPGQNIKQPGMQFHRIALHNDAEAALRAAAAASLSSLNLLSAVRVLSAGDRDMDVQAQECDKLREEYLEAVNTKDPDAYAGVLLSVMETIHKLCQEAEGDVDPRLVVVVAEAVNFPRRGKKVAETLFRERYAWQGKENGYSAEWSEVDACGRGDLLRLLYEVRNEVRLTHGDSSVDEAVRAVMRNRFIRISDDFGYEGLLKRAIASVKGGAENLGIDVDDSWAERFQALRGWAEGRS
Csm6 D 797 Actinomyces Procaprae , Synthetic Construct MTVLVHIVGEGDLGSDILKLKGEQRKQARHAGVTALRTAAVGGTASTPAEAVGLLLDGAASRDHKSRFARTPLALELGAIQAECRSGQVHVLLLGSNSGDGATADIAEALAALLACDEVRAVLHEQYGLEVTAELRADGNLNEQVGRGDLSSWVESAYGTAADRPVVVSMIGGATMMCLSAMGVVDQLGYDWRLAVAGSPDDDAARLVRRGHHGDAPFYWLRALGYLEQAAAWAQEHDREELIDGEHSRLQGDIDAVFGSAGRDDVSSSVTDEQLASLVAVEMARADNGAGLAVRAWVEKHYEALLAEENADRGQDDQISSVFKRLPGKELGKVLGMVRDEQLDQHSASAAWLLKTGDRLRPVGNRAVADAAAPTASELATIKNVPELWRRVPSWMHWPGQGRVLYICGIGAGYRPPSVIERVMEAGPGQELKRAVPGGMLEGGGVGEVDFLLLHSADPGSKRTAVKTCASVLLTTPKDGMIASGVDIIDYGGVSRDQFLAVEETSRKVAGIVREVLETKRPSAVAVVGLGQKGAVIGALEAAQAWCAGHAVPLFVETSVQPGQNIKQPGMQFHRIALHNDAEAALRAAAAASLSSLNLLSAVRVLSAGDRDMDVQAQECDKLREEYLEAVNTKDPDAYAGVLLSVMETIHKLCQEAEGDVDPRLVVVVAEAVNFPRRGKKVAETLFRERYAWQGKENGYSAEWSEVDACGRGDLLRLLYEVRNEVRLTHGDSSVDEAVRAVMRNRFIRISDDFGYEGLLKRAIASVKGGAENLGIDVDDSWAERFQALRGWAEGRS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-07-30
Deposition Author(s): Gao, H. , Lin, Z. , Liu, Y. , Shi, R. , Yang, M.