The composite cryo-em structure of bacteriophage spo1 capsid
PDB DOI: 10.2210/pdb9vel/pdb
Classification: VIRUS Organism(s): Bacillus Phage Spo1
Deposited: 2025-06-09 Deposition Author(s): Cai, C. , Fan, H. , Fang, Q. , Hu, H. , Kang, Y. , Li, L. , Li, X. , Liu, B. , Shao, Q. , Wang, A. , Wang, Y. , Zhao, X. , Zheng, Y.
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
Gp6.1 | C | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | F | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | G | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | D | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | I | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | J | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | O | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | N | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | M | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | H | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | K | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | L | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | B | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | E | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | P | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp6.1 | A | 468 | Bacillus Phage Spo1 | MNFGNGVNGFGNGSQADVDALNKALEAGHTVNPLDLEGGGAFRVESLERSLHNLSFTDQHIKFWKKIPKQKAYSTVEQYGQLLDYGRSQGAFVGEGVLPDTNDSTYARKAAFVKFLGTTREVTHPMTLVNSAFGNVIARQNKDGILWMLKQIEQALFWGDSKLAPGGQEGLQFDGINKMIDPENTIDLKGNYLEEKHINWGSQLILQNYGTPTDLMLPFEVMGQFSQEFFPKERVIMPTNDGYQAGVVVNKFMTHGGEVDFTPNLFLNKTTPLNMNASSQKAPAPGTLAAEIGTANDAEFGKQTGGGAGVYKYAVTFNNSHGESVPSNIVDVTIANEDVAKGVKLTITNPVSTAFPVEYIKVYRSEKDGQRLYEVAKFAVTTDNSGGVTEHTDKCEILANTYTAFMGEMSEEVIAFKQLTPMMKMDLATLGPVIRWMILMYGVPVMYAPKKFMKYTNIKADVPGYIGN |
Gp29.2 | R | 171 | Bacillus Phage Spo1 | MLFKYIHDVNAKVEEGRRYLSDVVRVALDKEETTDPDTQEVTSTSYRVTAYPVVQVGEEEVPYIPVHPKTAEPGQKVTVPTYDVPEKLPVLVRGRNPEATGDYDDHIWVTEEVEVRPLVDEVFKEDEFEKARLYYENVAAQLAEGDDIRHYYRKDLDREAGHYSVSRYPSF |
Gp29.2 | Q | 171 | Bacillus Phage Spo1 | MLFKYIHDVNAKVEEGRRYLSDVVRVALDKEETTDPDTQEVTSTSYRVTAYPVVQVGEEEVPYIPVHPKTAEPGQKVTVPTYDVPEKLPVLVRGRNPEATGDYDDHIWVTEEVEVRPLVDEVFKEDEFEKARLYYENVAAQLAEGDDIRHYYRKDLDREAGHYSVSRYPSF |
Gp29.2 | S | 171 | Bacillus Phage Spo1 | MLFKYIHDVNAKVEEGRRYLSDVVRVALDKEETTDPDTQEVTSTSYRVTAYPVVQVGEEEVPYIPVHPKTAEPGQKVTVPTYDVPEKLPVLVRGRNPEATGDYDDHIWVTEEVEVRPLVDEVFKEDEFEKARLYYENVAAQLAEGDDIRHYYRKDLDREAGHYSVSRYPSF |
Gp29.2 | V | 171 | Bacillus Phage Spo1 | MLFKYIHDVNAKVEEGRRYLSDVVRVALDKEETTDPDTQEVTSTSYRVTAYPVVQVGEEEVPYIPVHPKTAEPGQKVTVPTYDVPEKLPVLVRGRNPEATGDYDDHIWVTEEVEVRPLVDEVFKEDEFEKARLYYENVAAQLAEGDDIRHYYRKDLDREAGHYSVSRYPSF |
Gp2.7 | T | 57 | Bacillus Phage Spo1 | MTKLRLITGTVYTEMSAAEVRSYLQRGSKAGTINGYEDEAKTVPILISVESIEYIYL |
Gp36.3 | W | 96 | Bacillus Phage Spo1 | MNHNIQDLQMHANEVCRQIGAKAVQDYLKKVDPDMVLAYSDERGYFIFDPNEEPPTGSGNGETASQVELYIDLTKPLEGADFRRYESPNPSTITLP |
Method: ELECTRON MICROSCOPY