9TKV
Structure of duck rig-i (delta cards) bound to 31-mer rna mismatched hairpin with 5'pppg-c blunt end, mimicking the influenza b virus vrna promoter (panhandle).
PDB DOI: 10.2210/pdb9tkv/pdb
Classification: RNA BINDING PROTEIN Organism(s): Anas Platyrhynchos , Synthetic Construct
Deposited: 2025-12-10 Deposition Author(s): Cusack, S. , Ivanov, I.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.488 Å
Structure of duck rig-i (delta cards) bound to 31-mer rna mismatched hairpin with 5'pppg-c blunt end, mimicking the influenza b virus vrna promoter (panhandle).
Primary Citation of Related Structures: 9TKV
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA helicase | A | 692 | Anas Platyrhynchos , Synthetic Construct | ETKKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTIYSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRDSRRKEIKPKVVEGQKNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCRNNNCQHDWGITVKYLTFDNLPVIKIKSFVMESTATGTQMDFQKWKSINSSLKNFDVEEMSNLYPPF |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 31-mer RNA hairpin with 5'pppG-C blunt end mimicking the influenza B virus vRNA promoter (panhandle) | r | 30 | NA | GUAGUAACAAGAGGAAACUCUGCUUCUGCC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2025-12-10 Deposition Author(s): Cusack, S. , Ivanov, I.