PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9T0Z

Hpfcold bound hibernating c. burnetii 30s ribosome

PDB DOI: 10.2210/pdb9t0z/pdb

Classification: RIBOSOME
Organism(s): Coxiella Burnetii

Deposited: 2025-10-20
Deposition Author(s): Harmer, N.J. , Isupov, M.N. , Stuart, W.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.87 Å

9t0z
Literature

Hpfcold bound hibernating c. burnetii 30s ribosome

Harmer, N.J. , Isupov, M.N. , Stuart, W.S.

Primary Citation of Related Structures: 9T0Z


Proteins
Molecule Chains Sequence Length Organism Sequence
Small ribosomal subunit protein uS13 M 119 Coxiella Burnetii MAARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVGKFSVEGDLRRERSMDIKRKMDLGAYEGIRHRRGLPLRGQRTRSNARTRKGKRKPIRS
Small ribosomal subunit protein bS6 F 127 Coxiella Burnetii MRHYEIVILVHPDQSSQVPAMVERYQSMIKEKDGKVHRLEDWGRRQLAYSIDKVHKAHYLLMNIESDQGVISELENAFRYNDAVIRSLILKRDHAITKSSLIMQGAEKGKSSRKEKVAAEAEASEEA
Small ribosomal subunit protein bS20 T 90 Coxiella Burnetii MANSAQAKKRARQNEKRELHNASQRSAVRTAVKKILKSLQANDSSAAQSAYQHAVQILDKAAGRRIIHPNKAARLKSRLSQKIKNLSSSQ
Small ribosomal subunit protein uS4 D 206 Coxiella Burnetii MARYLGPKCRLSRREKTDLQLKSGIRAIDSKCNIERIPGMHWQRRGRTTDYGVQLRMKQMIKRYYDVLEKQFANYYKQADRLKGSTGDNLLKLLESRLDNVVYRMGFAATRAEARQLISHKAILVNGEVVNIPSYQVKPGDIIEVRSRAKGQLRIKGALELAQQRAPISWIEVDTKKMTGTFKEQPDVAELPAEFKVNLVVELYSK
Small ribosomal subunit protein uS5 E 168 Coxiella Burnetii MQEAGIGTTTDGIQEKLVAVRRTAKVVKGGRVFGFSALVVAGDGDGKVGFGLGKAREVPSAIQKATENARRNMISVPLYGATLHHAIKATHASSTVLMLPASEGTGVIAGNAMRAIFEVMGVQNVLAKCIGSSNPINVVRATFKGLKQMETPESVAAKRGKAIEEIVE
Small ribosomal subunit protein uS8 H 130 Coxiella Burnetii MMQDPISDMLTRIRNAQAVRKKEVVMPRSKLKMSIANVLKEEGYIVDYREEGDLTKAQLVITLKYHEGESVISEIRRVSSPALQVYKSKDELPKVKNGLGIAIISTSKGVMSDRQARRLGEGGEVLCYVS
Small ribosomal subunit protein bS16 P 137 Coxiella Burnetii MVVIRLARGGSKKNPFYHIVVADRRKPRDGRFIERVGYYNPMARGQDIRLQLEKERISHWLNQGAQTSLRVKHLIKKLEKSPEEAQKGGMRKGEFKRLQAEQAAKAQKKAVATEEPKAEEAKEAPPAESQAAEGKEE
Small ribosomal subunit protein uS12 L 124 Coxiella Burnetii MARINQLVRKPRRARAKKSDVPALEGCPQRRGVCTRVYTTTPKKPNSALRKVARVRITNGAEVTAYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDTAGVSGRRRGRSKYGEKKPKE
Small ribosomal subunit protein uS17 Q 89 Coxiella Burnetii MNKNEKMVRSLMGTVVSNKMNDTVVVRVERRVKHPKYGKFIKRSTKIHAHDKGNEGQIGDIVTIRECRPISKTKSWTLVKINERAEKVE
Large ribosomal subunit protein bL31 4 79 Coxiella Burnetii MKENIHPPYKQIKVTCSCGNTFMTGSTLDRELHLEICSACHPFYTGQQKMVDTAGRVERFRKKYAKRRAANASPEDEKK
Small ribosomal subunit protein uS7 G 191 Coxiella Burnetii MARRKAAPKRETLPDPLFHSELLAKFINAVMRNGKKSVAEKIVYGALDVVAKRVQNKSGEQGDGDGESGGKAGGIKKRSLGDIRTDENARALALETFKGALDKVMPNVEVKSRRVGGSTYQVPVEIRMARRQALARRWLVEYANKRNEKTMVLRLAHEILDAVEGRGGAIKKREDVHRMAKANQAFAHYKW
Small ribosomal subunit protein uS14 N 99 Coxiella Burnetii MAKLSVIERNKKRVRKSQSARKKRLELKKIIKKGTPEEQEQALLKLQKRPRDESPVRTRDRCRLCGRPCGTFKKFGLCRIHLREAAMRADVPGLKKASW
Small ribosomal subunit protein uS10 J 110 Coxiella Burnetii MSDNQRIRIRLKAFDHRLIDRSTREIVETARRTGAIIRGPILLPTKIERYTVLISPNIDKDARDQYEIRTHKRLVDISEPTDKTVDALMKLDLAAGVDVQIELLNKKSGA
Small ribosomal subunit protein uS11 K 123 Coxiella Burnetii MAKKRYRKVTEGIAHIKATFNNTMISVSDPQGNVLCFRSAGGSGFKGSRKGTPYGAQMASEEVGRLARDNFDMRRIAVRVKGPGAGRDSAIRGLRSAGLEVIHLEDRTPLPHNGCRPRKKRRV
Small ribosomal subunit protein bS18 R 73 Coxiella Burnetii MSFRRKKFCAFDAKNLQEIDYKDVNTLKDYIMESGRVVPSRITGTCAKHQRQISRAIKLARYLALLPYCDTHQ
Ribosome hibernation promoting factor 9 183 Coxiella Burnetii MRRSFMQVPLQITLRNIDPTPAIEDRIHKKADKLSQYSDQIISCHIVVELPKRHQHQGKLYNVRINLTLPGKEFAVNRNEVEDLYVAIRNAFDDMARKVEEEMRMRMGHVKTHPELLQGEIVRLFKEKDFGFIATPDGEEFYFNAGNVVHPTFEKLEVGTTVQFIEAIGDDGAQAHRVSAKER
Small ribosomal subunit protein uS19 S 95 Coxiella Burnetii MPRSTNKGPFVDHHLMKKVDQAQKEGSKRPIKTWSRRSMVVPEMVGLTIAIHNGRQHVPVYISENMVGHKLGEFAITRTFRAHSGDRKAKKEGEK
Small ribosomal subunit protein uS15 O 89 Coxiella Burnetii MSLASAETAKIVKEYQLGKDDTGSPEVQVAILTAKIIKLTDHMKAHKHDHHSRRGLLRMVSQRRKLLNFLKRNDLQRYLKLIERLGLRS
Small ribosomal subunit protein uS3 C 227 Coxiella Burnetii MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKGGEIEALRDEIFKVMKVPVHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAVQNTLRQGALGVKISVSGRLGGAEIARTEWYREGRVPLHTFRADIDYATASAKTTYGIIGVKVWIFKGEVHAPKPQAEEAAPQETEEEVK
Small ribosomal subunit protein uS9 I 139 Coxiella Burnetii MAQAAKKQNLGTGRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQSRFDVYATVQGGGDSGQAGAIRHGITRALIQYDEEGGEGGTWRSTLRKAGFVTRDPRMVERKKVGLHGARRGTQFSKR
Small ribosomal subunit protein bS21 U 74 Coxiella Burnetii MPMIDVPDNNAFDVAMRRFKRACEKAGILSKLRQIEYYEKPTSKRKRKRAAAVKRYAKKLQKEQEALERERTRY

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
16S ribosomal RNA a 1535 NA AAUUGAAGAGUUUGAUUCUGGCUCAGAUUGAACGCUAGCGGCAUGCUUAACACAUGCAAGUCGAACGGCAGCGCGGGGAGCUUGCUCCCUGGCGGCGAGUGGCGGACGGGUGAGUAAUGCGUAGGAAUCUACCUUGUAGUGGGGGAUAACCUGGGGAAACUCGGGCUAAUACCGCAUAAUCUCUUUGGAGCAAAGCGGGGGAUCUUCGGACCUCGUGCUAUAAGAUGAGCCUACGUCGGAUUAGCUUGUUGGUGGGGUAAUGGCCUACCAAGGCGACGAUCCGUAGCUGGUCUGAGAGGACGAUCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGGGAAACCCUGAUCCAGCAAUGCCGCGUGUGUGAAGAAGGCCUUCGGGUUGUAAAGCACUUUCGGUGGGGAAGAAAUUCUCAAGGGUAAUAUCCUUGGGCGUUGACGUUACCCACAGAAGAAGCACUGGCUAACUCUGUGCCAGCAGCCGCGGUAAUACAGAGAGUGCAAGCGUUAAUCGGAAUCACUGGGCGUAAAGCGCGCGUAGGUGGAUAUUUAAGUCGGAUGUGAAAGCCCUGGGCUUAACCUGGGAAUUGCACCCGAUACUGGGUAUCUUGAGUAUGGUAGAGGGAAGUGGAAUUUCCGGUGUAGCGGUGAAAUGCGUAGAUAUCGGAAAGAACACCAGUGGCGAAGGCGACUUCCUGGACCAAUACUGACACUGAGGCGCGAAAGCGUGGGGAGCAAACAGGAUUAGAGACCCUGGUAGUCCACGCCGUCAACGAUGAGAACUAGCUGUUGGGAAGUUCACUUCUUAGUAGCGAAGCUAACGCGUUAAGUUCUCCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAGAAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAAAACCUUACCUACCCUUGACAUCCUCGGAACUUGUCAGAGAUGAUUUGGUGCCUUCGGGAACCGAGUGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGUAACGAGCGCAACCCUCGUCCUUAGUUGCCAGCGAGUCAAGUCGGGAACUCUAAGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGAUGAUGUCAAGUCAUCAUGGCCCUUACGGGUAGGGCUACACACGUGCUACAAUGGGCAGUACAAAGGGUUGCCAAGCCGCGAGGUGGAGCUAAUCCCAGAAAACUGCUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUUGGAAUCGCUAGUAAUCGCGAAUCAGCAUGUCGCGGUGAAUACGUUCUCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGAAUUGUACCAGAAGCGGGUAGGCUAACCUUCGGGAGGCCGCUCACCACGGUAUGAUCCAUGACUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-10-20
Deposition Author(s): Harmer, N.J. , Isupov, M.N. , Stuart, W.S.