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FASTA Sequence PDB Format mmCIF Format
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9S3F

Cryo-em structure of gephyrin in complex with darpin 27f3, revealing linker-e domain interactions

PDB DOI: 10.2210/pdb9s3f/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Rattus Norvegicus , Synthetic Construct

Deposited: 2025-07-24
Deposition Author(s): Boettcher, B. , Hove, T. , Ortiz-Lopez, D. , Schindelin, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.12 Å

9s3f
Literature

Cryo-em structure of gephyrin in complex with darpin 27f3, revealing linker-e domain interactions

Boettcher, B. , Hove, T. , Ortiz-Lopez, D. , Schindelin, H.

Primary Citation of Related Structures: 9S3F


Proteins
Molecule Chains Sequence Length Organism Sequence
Isoform 5 of Gephyrin A 754 Rattus Norvegicus , Synthetic Construct MAHHHHHHGGSSGGSSEFMATEGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAALAAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
Isoform 5 of Gephyrin B 754 Rattus Norvegicus , Synthetic Construct MAHHHHHHGGSSGGSSEFMATEGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAALAAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
Darpin 27F3 C 182 Rattus Norvegicus , Synthetic Construct MRGSHHHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNASDVVGQTPLHLAAWSGHLEIVEVLLKTGADVNAEDMVGNTPLHLAAYVGHLEIVEVLLKAGADVNADDFRGRTPLHLAAYYGHLEIVEVLLKHGADVNAQDKFGKTPFDLAIDNGNEDIAEVLQKAAKLNDYKDDDDK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-07-24
Deposition Author(s): Boettcher, B. , Hove, T. , Ortiz-Lopez, D. , Schindelin, H.