9QRU
Cryo-em structure of the mmm ubiquitin ligase complex with nanobody 270 (composite map)
PDB DOI: 10.2210/pdb9qru/pdb
Classification: MEMBRANE PROTEIN Organism(s): Homo Sapiens , Lama Glama
Deposited: 2025-04-04 Deposition Author(s): Bazan, F. , Carrique, L. , Chalk, R. , Gao, L. , Hedger, G. , Kong, J.H. , Lartey, D. , Latorraca, N.R. , Marqusee, S. , Milenkovic, L. , Nocka, L.M. , Parashara, P. , Pardon, E. , Pusapati, G.V. , Rohatgi, R. , Rouse, S.L. , Sarkar, P. , Siebold, C. , Steyaert, J. , Williams, C.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.03 Å
Cryo-em structure of the mmm ubiquitin ligase complex with nanobody 270 (composite map)
Bazan, F. , Carrique, L. , Chalk, R. , Gao, L. , Hedger, G. , Kong, J.H. , Lartey, D. , Latorraca, N.R. , Marqusee, S. , Milenkovic, L. , Nocka, L.M. , Parashara, P. , Pardon, E. , Pusapati, G.V. , Rohatgi, R. , Rouse, S.L. , Sarkar, P. , Siebold, C. , Steyaert, J. , Williams, C.
Primary Citation of Related Structures: 9QRU
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Isoform 4 of E3 ubiquitin-protein ligase MGRN1 | D | 539 | Homo Sapiens , Lama Glama | MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSLEFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICELPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPALGPDSCSVGIDEGTKHHHHHH |
| Modulator of smoothened protein | A | 211 | Homo Sapiens , Lama Glama | MDKLTIISGCLFLAADIFAIASIANPDWINTGESAGALTVGLVRQCQTIHGRDRTCIPPRLPPEWVTTLFFIIMGIISLTVTCGLLVASHWRREATKYARWIAFTGMILFCMAALIFPIGFYINEVGGQPYKLPNNTVVGSSYVLFVLSIFFTIVGLLFAGKVCLPGGTLEVLFQGPGGSGSAWSHPQFEKGGGSGGGSGGSAWSHPQFEK |
| Isoform 2 of Multiple epidermal growth factor-like domains protein 8 | B | 477 | Homo Sapiens , Lama Glama | KCQCNGHADTCNEQDGTGCPCQNNTETGTCQGSSPSDRRDCYKYQCAKCRESFHGSPLGGQQCYRLISVEQECCLDPTSQTNCFHEPKRRALGPGRTVLFGVQPKFTNVDIRLTLDVTFGAVDLYVSTSYDTFVVRVAPDTGVHTVHIQPPPAPPPPPPPADGGPRGAGDPGGAGASSGPGAPAEPRVREVWPRGLITYVTVTEPSAVLVVRGVRDRLVITYPHEHHALKSSRFYLLLLGVGDPSGPGANGSADSQGLLFFRQDQAHIDLFVFFSVFFSCFFLFLSLCVLLWKAKQALDQRQEQRRHLQEMTKMASRPFAKVTVCFPPDPTAPASAWKPAGLPPPAFRRSEPFLAPLLLTGAGGPWGPMGGGCCPPAIPATTAGLRAGPITLEPTEDGMAGVATLLLQLPGGPHAPNGACLGSALVTLRHRLHEYCGGGGGAGGSGHGTGAGRKGLLSQDNLTSMSLGTETSQVAPA |
| Nanobody 270 | C | 129 | Homo Sapiens , Lama Glama | QVQLVESGGGLVQAGGSLRLSCAASGSIFSYDDMGWYRQAPGKQRELVATFTNVGSTNYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCHAYTVRRFQGMEYWGKGTQVTVSSHHHHHHEPEA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-04-04 Deposition Author(s): Bazan, F. , Carrique, L. , Chalk, R. , Gao, L. , Hedger, G. , Kong, J.H. , Lartey, D. , Latorraca, N.R. , Marqusee, S. , Milenkovic, L. , Nocka, L.M. , Parashara, P. , Pardon, E. , Pusapati, G.V. , Rohatgi, R. , Rouse, S.L. , Sarkar, P. , Siebold, C. , Steyaert, J. , Williams, C.