PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9QGM

Cryo-em structure of the plpvc1 central spike, 3-fold symmetrized (c3), in extended state

PDB DOI: 10.2210/pdb9qgm/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Photorhabdus Luminescens

Deposited: 2025-03-14
Deposition Author(s): Marin-Arraiza, L. , Taylor, N.M.I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.82 Å

9qgm
Literature

Cryo-em structure of the plpvc1 central spike, 3-fold symmetrized (c3), in extended state

Marin-Arraiza, L. , Taylor, N.M.I.

Primary Citation of Related Structures: 9QGM


Proteins
Molecule Chains Sequence Length Organism Sequence
Photorhabdus luminescens subsp. laumondii TTO1 complete genome segment 6/17 8A 533 Photorhabdus Luminescens MKIPEITIKISGKTLNQFTAINLTVNHYINGIPSVNITLGIAGDANYIFDAKAQAELANCRPNNELIVQIQKTILFKGIIVRQALKFKGQDSLMTLTAKHPLQKLTDGLHSQLFSKQSDEAIIKKLFSQAGIQTTIKQAPQLKTVHEQMVQFRCNDWTFLKSRLIATNTWLLPGNEVVTLITPKALNQSTVHTIHQSTNDQDIVLFEANLQWDNQRSPKTVSVQSWDITQQKLSQTIQVKNSGLGSNKLAVDSITTLTNQDWQWVFNYPLDNEQAKYLAQGIMDNLRSDNVSGSFEVEGDSCYQPGDVLALNGFGQGMDGQGIITGVSQIINQRQGWRTRLTLGMPPDAEQAVPPVKELHVGIVEKYQPDSQSLGRIPVKIPALNLTNSVLFARLGKPYASHESGFCFYPEPGDEVIIGFFECDPRFPVILGSMHNPKNKAPVEPSEKNPMKTLVIKQGDHQQALVFNNQDKTVALNSGKNTLSLQQDKDITLNSANNLITNAQEIKIQAEKSLSASGKSGVDIKGAKINLTQ
Photorhabdus luminescens subsp. laumondii TTO1 complete genome segment 6/17 8B 533 Photorhabdus Luminescens MKIPEITIKISGKTLNQFTAINLTVNHYINGIPSVNITLGIAGDANYIFDAKAQAELANCRPNNELIVQIQKTILFKGIIVRQALKFKGQDSLMTLTAKHPLQKLTDGLHSQLFSKQSDEAIIKKLFSQAGIQTTIKQAPQLKTVHEQMVQFRCNDWTFLKSRLIATNTWLLPGNEVVTLITPKALNQSTVHTIHQSTNDQDIVLFEANLQWDNQRSPKTVSVQSWDITQQKLSQTIQVKNSGLGSNKLAVDSITTLTNQDWQWVFNYPLDNEQAKYLAQGIMDNLRSDNVSGSFEVEGDSCYQPGDVLALNGFGQGMDGQGIITGVSQIINQRQGWRTRLTLGMPPDAEQAVPPVKELHVGIVEKYQPDSQSLGRIPVKIPALNLTNSVLFARLGKPYASHESGFCFYPEPGDEVIIGFFECDPRFPVILGSMHNPKNKAPVEPSEKNPMKTLVIKQGDHQQALVFNNQDKTVALNSGKNTLSLQQDKDITLNSANNLITNAQEIKIQAEKSLSASGKSGVDIKGAKINLTQ
Photorhabdus luminescens subsp. laumondii TTO1 complete genome segment 6/17 8C 533 Photorhabdus Luminescens MKIPEITIKISGKTLNQFTAINLTVNHYINGIPSVNITLGIAGDANYIFDAKAQAELANCRPNNELIVQIQKTILFKGIIVRQALKFKGQDSLMTLTAKHPLQKLTDGLHSQLFSKQSDEAIIKKLFSQAGIQTTIKQAPQLKTVHEQMVQFRCNDWTFLKSRLIATNTWLLPGNEVVTLITPKALNQSTVHTIHQSTNDQDIVLFEANLQWDNQRSPKTVSVQSWDITQQKLSQTIQVKNSGLGSNKLAVDSITTLTNQDWQWVFNYPLDNEQAKYLAQGIMDNLRSDNVSGSFEVEGDSCYQPGDVLALNGFGQGMDGQGIITGVSQIINQRQGWRTRLTLGMPPDAEQAVPPVKELHVGIVEKYQPDSQSLGRIPVKIPALNLTNSVLFARLGKPYASHESGFCFYPEPGDEVIIGFFECDPRFPVILGSMHNPKNKAPVEPSEKNPMKTLVIKQGDHQQALVFNNQDKTVALNSGKNTLSLQQDKDITLNSANNLITNAQEIKIQAEKSLSASGKSGVDIKGAKINLTQ
Photorhabdus luminescens subsp. laumondii TTO1 complete genome segment 6/17 6A 59 Photorhabdus Luminescens MTVEIKELIIQAKVTDSASDLLSPRTLAQEALDNARLIEMVKQEVLDALREAGGRYELN
Photorhabdus luminescens subsp. laumondii TTO1 complete genome segment 6/17 6B 59 Photorhabdus Luminescens MTVEIKELIIQAKVTDSASDLLSPRTLAQEALDNARLIEMVKQEVLDALREAGGRYELN
Photorhabdus luminescens subsp. laumondii TTO1 complete genome segment 6/17 6C 59 Photorhabdus Luminescens MTVEIKELIIQAKVTDSASDLLSPRTLAQEALDNARLIEMVKQEVLDALREAGGRYELN
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-03-14
Deposition Author(s): Marin-Arraiza, L. , Taylor, N.M.I.