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9PHS

Crystal structure of the a/puerto rico/8/1934 (h1n1) influenza virus hemagglutinin in complex with fusion inhibitor cyclic peptide cp141085 (cp1)

PDB DOI: 10.2210/pdb9phs/pdb

Classification: VIRAL PROTEIN
Organism(s): Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct

Deposited: 2025-07-09
Deposition Author(s): Kadam, R.U. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.02 Å

9phs
Literature

Crystal structure of the a/puerto rico/8/1934 (h1n1) influenza virus hemagglutinin in complex with fusion inhibitor cyclic peptide cp141085 (cp1)

Kadam, R.U. , Wilson, I.A.

Primary Citation of Related Structures: 9PHS


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin A 326 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGKCNIAGWLLGNPECDPLLPVRSWSYIVETPNSENGICYPGDFIDYEELREQLSSVSSFERFEIFPKESSWPNHNTNGVTAACSHEGKSSFYRNLLWLTEKEGSYPKLKNSYVNKKGKEVLVLWGIHHPPNSKEQQNLYQNENAYVSVVTSNYNRRFTPEIAERPKVRDQAGRMNYYWTLLKPGDTIIFEANGNLIAPMYAFALSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin C 326 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGKCNIAGWLLGNPECDPLLPVRSWSYIVETPNSENGICYPGDFIDYEELREQLSSVSSFERFEIFPKESSWPNHNTNGVTAACSHEGKSSFYRNLLWLTEKEGSYPKLKNSYVNKKGKEVLVLWGIHHPPNSKEQQNLYQNENAYVSVVTSNYNRRFTPEIAERPKVRDQAGRMNYYWTLLKPGDTIIFEANGNLIAPMYAFALSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin E 326 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCRLKGIAPLQLGKCNIAGWLLGNPECDPLLPVRSWSYIVETPNSENGICYPGDFIDYEELREQLSSVSSFERFEIFPKESSWPNHNTNGVTAACSHEGKSSFYRNLLWLTEKEGSYPKLKNSYVNKKGKEVLVLWGIHHPPNSKEQQNLYQNENAYVSVVTSNYNRRFTPEIAERPKVRDQAGRMNYYWTLLKPGDTIIFEANGNLIAPMYAFALSRGFGSGIITSNASMHECNTKCQTPLGAINSSLPYQNIHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin HA2 chain B 176 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKEFNKLEKRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNREKVDGV
Hemagglutinin HA2 chain D 176 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKEFNKLEKRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNREKVDGV
Hemagglutinin HA2 chain F 176 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNTVIEKMNIQFTAVGKEFNKLEKRMENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCDNECMESVRNGTYDYPKYSEESKLNREKVDGV
cyclic peptide CP141085 G 19 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct PPVSLYEDPLGVAGGMGVY
cyclic peptide CP141085 H 19 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct PPVSLYEDPLGVAGGMGVY
cyclic peptide CP141085 K 19 Influenza A Virus (A/Puerto Rico/8/1934(H1N1)) , Synthetic Construct PPVSLYEDPLGVAGGMGVY
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-07-09
Deposition Author(s): Kadam, R.U. , Wilson, I.A.