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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9PHC

In vitro reconstituted complex of purified s. pombe large ribosomal subunit and snor

PDB DOI: 10.2210/pdb9phc/pdb

Classification: RIBOSOME
Organism(s): Schizosaccharomyces Pombe 972H-

Deposited: 2025-07-09
Deposition Author(s): Gluc, M. , Jomaa, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.8 Å

Literature

In vitro reconstituted complex of purified s. pombe large ribosomal subunit and snor

Gluc, M. , Jomaa, A.

Primary Citation of Related Structures: 9PHC


Proteins
Molecule Chains Sequence Length Organism Sequence
Large ribosomal subunit protein eL42 B0 106 Schizosaccharomyces Pombe 972H- MVNIPKTRKTYCPGKNCRKHTVHRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHKKAKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTKGAAIQF
Large ribosomal subunit protein eL33A BR 108 Schizosaccharomyces Pombe 972H- MPAQGHRLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV
Large ribosomal subunit protein eL34B BS 111 Schizosaccharomyces Pombe 972H- MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREFARLSHNQKKVQRAYGGCLSANAVKDRIVRAFLIEEQKIVKQKLKQMSQK
Large ribosomal subunit protein uL29 BT 122 Schizosaccharomyces Pombe 972H- MALKTFELRKQSQENLAEQLQELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINESNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYEQSRKTLKQIKKERYFPLRKYALKA
Large ribosomal subunit protein eL36B BU 99 Schizosaccharomyces Pombe 972H- MAPGLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSRLAH
Large ribosomal subunit protein eL37B BV 91 Schizosaccharomyces Pombe 972H- MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRSGKPAAAVAASA
Large ribosomal subunit protein eL38A BW 74 Schizosaccharomyces Pombe 972H- MPRQISDIKQFLEIARRKDATSARIKKNTNKDVKFKLRCSKYLYTLVVADAKKAEKLRQSLPPDLTVTEVGKKA
Large ribosomal subunit protein eL39 BX 51 Schizosaccharomyces Pombe 972H- MPSHKSFRTKQKLAKAARQNRPIPQWIRLRTGNTVHYNMKRRHWRRTKLNI
Large ribosomal subunit protein eL28 BY 134 Schizosaccharomyces Pombe 972H- MSVSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSPRGVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVARASAILSSQRPKKTVA
Large ribosomal subunit protein eL15B BZ 201 Schizosaccharomyces Pombe 972H- MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGIGKGHRYNNSPQHATWLRHNTLSLRRYR
Large ribosomal subunit protein uL13A BA 197 Schizosaccharomyces Pombe 972H- MSEFQKVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYSDIVSKLEERRKVKSAAFYQAKLAKQKKIASAKAASSVNGKLAEFGY
Large ribosomal subunit protein eL43A B1 94 Schizosaccharomyces Pombe 972H- MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGCKKVLAGGAWTVTTAAATSARSTIRRLREMVEV
Large ribosomal subunit protein uL22A BB 187 Schizosaccharomyces Pombe 972H- MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVTQARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPKANDTVSRVSLKQGAKARNLAARKAITAA
Large ribosomal subunit protein eL18B BC 187 Schizosaccharomyces Pombe 972H- MGIDIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFGPHKHKAPYVRSEGRKFERARGRRKSRAFKV
Large ribosomal subunit protein eL19B BD 193 Schizosaccharomyces Pombe 972H- MANLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRARAKAARQRRAKAVEEKREQIYTAAEKIEE
Large ribosomal subunit protein eL20A BE 176 Schizosaccharomyces Pombe 972H- MALKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY
Large ribosomal subunit protein eL21B BF 160 Schizosaccharomyces Pombe 972H- MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYDTTI
Large ribosomal subunit protein eL22 BG 117 Schizosaccharomyces Pombe 972H- MVKKNTKVSNKYIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFSGRYLKYLTKKFLKKHSLRDWLRVVSTKKGVYELRYYNVVVGNDEEEQ
Large ribosomal subunit protein uL14B BH 139 Schizosaccharomyces Pombe 972H- MSRGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAGTVV
Large ribosomal subunit protein eL24B BI 149 Schizosaccharomyces Pombe 972H- MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKRAASESEKKAIKAKSAASSARGQAIKNAKVAARR
Large ribosomal subunit protein uL23A BJ 141 Schizosaccharomyces Pombe 972H- MSVAKAKGAQKTVQKGIHNKVAKKVRTSTTFRRPKTLQLSRKPKYARKSVAHAPRLDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKEAVRKLYSVEPVKINTLIRPNGTKKAFVKLSADADALDVANRIGFL
Large ribosomal subunit protein uL24 BK 126 Schizosaccharomyces Pombe 972H- MKFSRDVTSSRRKQRKAHFGAPSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRGSNKGREGKITSVYRKKFLLLIERVTREKANGASAPVGIDASKVVITKLHLDKDRKDLIVRKGGKVE
Large ribosomal subunit protein eL27A BL 136 Schizosaccharomyces Pombe 972H- MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKSAWFFTPLRF
Large ribosomal subunit protein uL15B BM 148 Schizosaccharomyces Pombe 972H- MPTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFHLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDTPVIIQTRYVSRRAEEKIKQAGGVVELIA
Large ribosomal subunit protein uL2C BN 253 Schizosaccharomyces Pombe 972H- MGRVIRAQRKSGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIAARRTGLLRGAAAVEN
Large ribosomal subunit protein uL3A BO 388 Schizosaccharomyces Pombe 972H- MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLDRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKNWFKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTPLAQKKAHLMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLKKDVA
Large ribosomal subunit protein uL4A BP 363 Schizosaccharomyces Pombe 972H- MAAARPTVSIYSKDGSVSSETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKTKEAVALLKEIKAYRDVVKVANSRKLRAGKGKLRNRRHVQRRGPLVVFNEDAGIVKAFRNIPGVEIVNVRRLNLLQLAPGGHLGRFVIWTKSAFGLLDSVFGSTTEAAQLKKNYFLPENIISNADVTRLINSDEIQSIVKAAGPSRVKRAHVQKKNPLKNKAVLARLNPYAKAYKANVKLNTGKTPKAAGEKFLTVLHEN
Large ribosomal subunit protein uL18B BQ 294 Schizosaccharomyces Pombe 972H- MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERKERFNAKVIEAGRA
SDO1-like protein C21C3.19 HS 106 Schizosaccharomyces Pombe 972H- MSSSKANQTRVCYQPEDTTFIIIASNGPDVMRWRKDKTVPLTEIVDSFQVFTTSNNKGNEGQLITASKQELENTFGTSKDVDVVTKILTDGKIIPHREHGKHKEVN

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
28S ribosomal RNA b2 3498 NA AUUUGACCUCAAAUCAGGUAGGACUACGCGCUGAACUUAAGCAUAUCAAUAAGCGCAGGAAAAGAAAAUAACCAUGAUUCCCUCAGUAACGGCGAGUGAAGCGGGAAAAGCUCAAAUUUGAAAUCUGGCAACAUUUCUUUUGUUGUCCGAGUUGUAAUUUCAAGAAGCUGCUUUGAGUGUAGACGAUCGGUCUAAGUUCCUUGGAACAGGACGUCAGAGAGGGUGAGAACCCCGUCUUUGGUCGAUUGGAUAUGCCAUAUAAAGCGCUUUCGAAGAGUCGAGUUGUUUGGGAAUGCAGCUCUAAAUGGGUGGUAAAUUUCAUCUAAAGCUAAAUAUUGGCGAGAGACCGAUAGCGAACAAGUAGAGUGAUCGAAAGAUGAAAAGAACUUUGAAAAGAGAGUUAAAUAGUACGUGAAAUUGCUGAAAGGGAAGCAUUGGAAAUCAGUCUUACCUGGGUGAGAUCAGUAGUCUCUUCGCGAGACUAUGCACUCUGAACCUGUGGUAGGUCAGCAUCAGUUUUCGGGGGCGGAAAAAGAAUAAGGGAAGGUGGCUUUCCGGGUUCUGCCUGGGGAGUGUUUAUAGCCCUUGUUGUAAUACGUCCACUGGGGACUGAGGACUGCGGCUUCGUGCCAAGGAUGCUGACAUAAUGGUUUUCAAUGGCCCGUCUUGAAACACGGACCAAGGAGUCUAGCAUCUAUGCGAGUGUUUGGGUGAUGAAAACCCAUCCGCGAAAUGAAAGUGAAUGCAGGUGGGAACGCCCUUGUGGCGUGCACCAUCGACCGACCCGGAAGUUUGUCAAUGGAAGGGUUUGAGUAAGAGCAUAGCUGUUGGGACCCGAAAGAUGGUGAACUAUGCCUGAAUAGGGUGAAGCCAGAGGAAACUCUGGUGGAGGCUCGUAGAGAUUCUGACGUGCAAAUCGAUCUUCAAAUUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCUGCCGAAGUUUCCCUCAGGAUAGCAGAAACUCAGAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGAGGUCUUGGGGAAGGAAUUUCCUCAACCUAUUCUCAAACUUUAAAUAUGUAAGACGCCCUUGUCGCUUAAUUGGACGUGGGCCAUCGAAUGAGAGUUUCUAGUGGGCCAUUUUUGGUAAGCAGAACUGGCGAUGCGGGAUGAACCGAACGUGAGGUUAAGGUGCCGGAAUGUACGCUCAUCAGACACCAGAAAAGGUGUUAGUUCAUCUAGACAGCAGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCUGCCGAAUGAACUAGCCCUGAAAAUGGAUGGCGCUUAAGCGUACUACCCAUACCUCACCGUCUGGGUUAGCUUUGAGAAGCUCAGACGAGUAGGCAGGCGUGGAGGUUUGUGACGAAGCCUUGGGCGUGAGCCUGGGUCGAACAGCCUCUAGUGCAGAUCUUGGUGGAAGUAGCAAAUAUUCAAAUGAGAACUUUGAAGACUGAAGUGGGGAAAGGUUCCAUGUGAACAGCAGUUGGACAUGGGUUAGUCGAUCCUAAGAGAUAGGGAAGCUCCGUAUGAAAGUUGCACGAUUUUUCGUGCCUCCUAUCGAAAGGGAAUCCGGUUAAUAUUCCGGAACCAGAAGGUGGAAUCAACACGGCAACGUAAAUGAAGUUGGAGACGUCGGCGGGAGCCCUGGGAAGAGUUCUCUUUUCUUUUUAACAAACCAUUGAACUACCCUGAAAUCGGUUUAUCCGGAGCUAGGGUAUGGUGUUUGGAAGAGUUCAGCGCCUCAUGCUGAAUCCGGUGCGCUCUCGACGGCCCUUGAAAAUCCAACGGAAGAAUGGACCUUCGGGUCCUUGUUUUCACAUCUGGUCGUACUCAUAACCGCAGCAGGUCUCCAAGGUGAACAGCCUCUAGUUGAUAGAACAAUGUAGAUAAGGGAAGUCGGCAAAAUGGAUCCGUAACUUCGGGAUAAGGAUUGGCUCUAAGGGUUGGGUACGUUGGGCCUUGGAACCUGAACGGUUGCUGGACUGAGCGUGGACCGAUGUCUUUUCUCGCCUUUCGGGGUGAGAAGGGAUGUUGGACCUGCUUGGACCUUGGCGGCCGGGAAGUCCUUGGUCGGGCUUUUCUCCUUCUCGGGGAUUAUGCUCUUACUGGCGUACGUUUAACAACCAACUUAGAACUGGUACGGACAAGGGGAAUCUGACUGUCUAAUUAAAACAUAGCAUUGCGAUGGCCAGAAAGUGGUGUUGACGCAAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAAAUUCAACCAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAACUAGUGACGCGCAUGAAUGGAUUAACGAGAUUCCCACUGUCCCUAUCUACUAUCUAGCGAAACCACAGCCUGGGGAACGGGCCAGGCAAAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUUUGACAUUGUGAAGAGACAUAGAGGGUGUAGGAUAAGUGGGAGUAUGUUUCGGCAUACGCCGGUGAAAUACCACUACCUUUAUCGUUUCUUUACUUAAUCAAUGAAGCGGAAUUGGGAUUUAUUUCCCAUAUUCUAGCGUUAAAGUUUCUUCGCGAACUGAUCCGCGUUGAUGACAUUGUCAGGUGGGGAGUUUGGCUGGGGCGGCACAUCUGUUAAAAGAUAACGCAGGUGUCCUAAGGGGGACUCAUCGAGAACAGAAAUCUCGAGUAGAAUAAAAGGGUAAAAGUCCCCUUGAUUUUGAUUUUCAGUGUGAAUACAAACCAUGAAAGUGUGGCCUAUCGAUCCUUUGUUCCCUCGAAAUUUGAGGACAGAGGUGCCAGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCAGCCAAGCGUUCAUAGCGACGUUGCUUUUUGAUUCUUCGAUGUCGGCUCUUCCUAUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAAGUGUCGUCGCAAUGGUAAUUCAACUUAGUACGAGAGGAACCGUUGAUUCAGAUCAUUGGUAUUUGCGGCUGCCUGACAAGGCAAUGCCGCGGAGCUAUCAUCUGCCGGAUAACGGCUGAACGCCUCUAAGCCAGAAUCCGUGCCAGAAAGCGACGAUUUUUUGGUCCGCAUGAUUUAUAUGUAUAAAAAUAGAGGUAGGACUUGUUCCUACUCUCCUGUAUCGUAGAAGAUGGGCGAUGGUUGAUGAAACGGAAGUGUUUUAUUGACUUGUCCAUGAAAUUCCAUUGAAAUCUUGUGCGGAAUCGAAUCCAUUGCAUACGACUUUAAUGUGGAACGGGGUAUUGUAAGCAGUAGAGUAGCCUUGUUGUUACGAUCUGCUGAGAUUAAGCCUUUGUUCCCAAGAUUUGU
5S ribosomal RNA b3 246 NA UUAAACGUCUACGGCCAUACCUAGGCGAAAACACCAGUUCCCGUCCGAUCACUGCAGUUAAGCGUCUGAGGGCCUCGUUAGUACUAUGGUUGGAGACAACAUGGGAAUCCGGGGUGCUGUAGGCUUCCUUUUAUUCUUUUUGCUUUUUGUUUGAGCUCAUUUGGGAAUAAUAAUCAUUUACCUUGAUUCGUACUUAUUCAUUUCAAUACCUUUGCACAUAAUAUUAUUGUGUACUAUGAAUGAUAU
5.8S ribosomal RNA b4 165 NA AUUAUUUAAAACUUUCAGCAACGGAUCUCUUGGCUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCUUUGGGUUCUACCAAAGGCAUGCCUGUUUGAGUGUCAUU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-07-09
Deposition Author(s): Gluc, M. , Jomaa, A.