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9OWI

Structure of the a. thaliana tbp bound to tbp-ag nicked dna site

PDB DOI: 10.2210/pdb9owi/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Arabidopsis Thaliana , Synthetic Construct

Deposited: 2025-06-02
Deposition Author(s): Schumacher, M.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.48 Å

9owi
Literature

Structure of the a. thaliana tbp bound to tbp-ag nicked dna site

Schumacher, M.A.

Primary Citation of Related Structures: 9OWI


Proteins
Molecule Chains Sequence Length Organism Sequence
TATA-box-binding protein 1 B 203 Arabidopsis Thaliana , Synthetic Construct GSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 E 203 Arabidopsis Thaliana , Synthetic Construct GSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 I 203 Arabidopsis Thaliana , Synthetic Construct GSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 J 203 Arabidopsis Thaliana , Synthetic Construct GSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 K 203 Arabidopsis Thaliana , Synthetic Construct GSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 L 203 Arabidopsis Thaliana , Synthetic Construct GSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*GP*CP*GP*C)-3') c 12 NA CTATAAAAGCGC
DNA (5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*GP*CP*GP*C)-3') f 12 NA CTATAAAAGCGC
DNA (5'-D(*TP*TP*TP*TP*AP*TP*AP*G)-3') d 8 NA TTTTATAG
DNA (5'-D(*TP*TP*TP*TP*AP*TP*AP*G)-3') h 8 NA TTTTATAG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-06-02
Deposition Author(s): Schumacher, M.A.