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FASTA Sequence PDB Format mmCIF Format
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9OEF

Structure of the human astrovirus va1 capsid spike bound to antibody 7c8

PDB DOI: 10.2210/pdb9oef/pdb

Classification: VIRAL PROTEIN
Organism(s): Astrovirus Va1 , Mus Musculus

Deposited: 2025-04-28
Deposition Author(s): Balasco Serrao, V.H. , Dubois, R.M. , Dzimianski, J.V. , Ghosh, A.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.69 Å

9oef
Literature

Structure of the human astrovirus va1 capsid spike bound to antibody 7c8

Balasco Serrao, V.H. , Dubois, R.M. , Dzimianski, J.V. , Ghosh, A.

Primary Citation of Related Structures: 9OEF


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein VP38 C 289 Astrovirus Va1 , Mus Musculus MGPIPPTGVPVGDFFVCGRMTTLHMGGQSGIQATTLVNGMIYRTDHPEPSSSPVSNWEFTVLENNTIVGAGMGCVWFQKSEALVWTLDGQKLSGWNTLDGVGTTQLTVAWRQHNRTIYGWANVVAWNSEEWHTNAEQPHQPILRLTYWLVKINVLSEPEDFDVVQKSPLAYLEDYTTAQSKSAIQKLNFQTFQKPEGGGTLRAQYSTTPRQGDFAVIWQIGRHNFDMSTGKGTPVESLSDYVMPQQKDAHIGMWYRALTSVGPRTDVLTLHFHLPTVEKAAAELALVPR
Spike protein VP38 A 289 Astrovirus Va1 , Mus Musculus MGPIPPTGVPVGDFFVCGRMTTLHMGGQSGIQATTLVNGMIYRTDHPEPSSSPVSNWEFTVLENNTIVGAGMGCVWFQKSEALVWTLDGQKLSGWNTLDGVGTTQLTVAWRQHNRTIYGWANVVAWNSEEWHTNAEQPHQPILRLTYWLVKINVLSEPEDFDVVQKSPLAYLEDYTTAQSKSAIQKLNFQTFQKPEGGGTLRAQYSTTPRQGDFAVIWQIGRHNFDMSTGKGTPVESLSDYVMPQQKDAHIGMWYRALTSVGPRTDVLTLHFHLPTVEKAAAELALVPR
7C8 heavy chain H 219 Astrovirus Va1 , Mus Musculus EVQLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWIRQTPEKRLEWVATISDGGFSTYYPDSVKGRFTISRDNAKNNLFLQMSSLKSEDTAIYYCARFGAYSTFWGQQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
7C8 heavy chain J 219 Astrovirus Va1 , Mus Musculus EVQLVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWIRQTPEKRLEWVATISDGGFSTYYPDSVKGRFTISRDNAKNNLFLQMSSLKSEDTAIYYCARFGAYSTFWGQQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
7C8 light chain L 215 Astrovirus Va1 , Mus Musculus QIVLSQSPAILSASPGEKVTMTCRASSSVSYMYWYQQQKPGSPKPWIYATSNLASGVPARFSGSGSGTSYSLTIISRVEAEDATYYCQQWSSDPPMTFGGGTTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
7C8 light chain K 215 Astrovirus Va1 , Mus Musculus QIVLSQSPAILSASPGEKVTMTCRASSSVSYMYWYQQQKPGSPKPWIYATSNLASGVPARFSGSGSGTSYSLTIISRVEAEDATYYCQQWSSDPPMTFGGGTTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-04-28
Deposition Author(s): Balasco Serrao, V.H. , Dubois, R.M. , Dzimianski, J.V. , Ghosh, A.