Crystal structure of np204 tcr in complex with np366-h-2db
PDB DOI: 10.2210/pdb9nw2/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2025-03-21 Deposition Author(s): Mallis, R.J. , Reinherz, E.L. , Tan, K.
Crystal structure of np204 tcr in complex with np366-h-2db
Mallis, R.J. , Reinherz, E.L. , Tan, K.
Primary Citation of Related Structures: 9NW2
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NP204 TCR alpha-chain | A | 214 | Mus Musculus , Synthetic Construct | QQKVQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAAILATGGNNKLTFGQGTVLSVIPDIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMKAMDSKSNGAIAWSNQTSFTCQDIFKETNATYPSSDVPCSSADLEVLFQ |
| NP204 TCR alpha-chain | F | 214 | Mus Musculus , Synthetic Construct | QQKVQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAAILATGGNNKLTFGQGTVLSVIPDIQNPEPAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMKAMDSKSNGAIAWSNQTSFTCQDIFKETNATYPSSDVPCSSADLEVLFQ |
| NP204 TCR beta-chain | B | 253 | Mus Musculus , Synthetic Construct | VTLLEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRTLYCTCSADRRNSYNSPLYFAAGTRLTVTEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRADCSSADLEVLFQ |
| NP204 TCR beta-chain | G | 253 | Mus Musculus , Synthetic Construct | VTLLEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRTLYCTCSADRRNSYNSPLYFAAGTRLTVTEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRADCSSADLEVLFQ |
| H-2 class I histocompatibility antigen, D-B alpha chain | C | 281 | Mus Musculus , Synthetic Construct | MGPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEPPPST |
| H-2 class I histocompatibility antigen, D-B alpha chain | H | 281 | Mus Musculus , Synthetic Construct | MGPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEPPPST |
| Beta-2-microglobulin | D | 100 | Mus Musculus , Synthetic Construct | MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM |
| Beta-2-microglobulin | I | 100 | Mus Musculus , Synthetic Construct | MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM |
| Nucleoprotein peptide | E | 9 | Mus Musculus , Synthetic Construct | ASNENMETM |
| Nucleoprotein peptide | J | 9 | Mus Musculus , Synthetic Construct | ASNENMETM |
Method: X-RAY DIFFRACTION
Deposited Date: 2025-03-21 Deposition Author(s): Mallis, R.J. , Reinherz, E.L. , Tan, K.