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9N96

Cryo-em structure of human u7 sm ring in complex with symplekin n-terminal domain

PDB DOI: 10.2210/pdb9n96/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2025-02-10
Deposition Author(s): Desotell, A. , Tong, L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.18 Å

9n96
Literature

Cryo-em structure of human u7 sm ring in complex with symplekin n-terminal domain

Desotell, A. , Tong, L.

Primary Citation of Related Structures: 9N96


Proteins
Molecule Chains Sequence Length Organism Sequence
Small nuclear ribonucleoprotein Sm D3 A 146 Homo Sapiens , Synthetic Construct MGSSHHHHHHSSGLVPRGSHMSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGMGRGNIFQKRR
Small nuclear ribonucleoprotein-associated proteins B and B' B 95 Homo Sapiens , Synthetic Construct MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARV
U7 snRNA-associated Sm-like protein LSm10 C 123 Homo Sapiens , Synthetic Construct MAVSHSVKERTISENSLIILLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTDRWGHQVKLDDLFVTGRNVRYVHIPDDVNITSTIEQQLQIIHRVRNFGGKGQGRWEFPPKNCK
U7 snRNA-associated Sm-like protein LSm11 D 259 Homo Sapiens , Synthetic Construct MHHHHHHSGGSMEERERGARSAGAGSPARPPSPRLDVSSDSFDPLLALYAPRLPPIPYPNAPCFNNVAEYESFLRTGVRGGGRGRGRARGAAAGSGVPAAPGPSGRTRRRPDAPAPDPEEAQEAERAMVAKEEGDGAAGAGRRGPGRSRKAPRNVLTRMPLHEGSPLGELHRCIREGVKVNVHIRTFKGLRGVCTGFLVAFDKFWNMALTDVDETYRKPVLQSRKKKRKPKVDYQQVFTRHINQIFIRGENVLLVHLAQ
Small nuclear ribonucleoprotein E E 92 Homo Sapiens , Synthetic Construct MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
Small nuclear ribonucleoprotein F F 86 Homo Sapiens , Synthetic Construct MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEEEEDGEMRE
Small nuclear ribonucleoprotein G G 84 Homo Sapiens , Synthetic Construct MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERVLEHHHHHH
Symplekin J 1072 Homo Sapiens , Synthetic Construct MTTSERVVDLLNQAALITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKMKLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMVYLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEKVVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVVRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAHIPNSIMTILEAS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
U7 snRNA z 63 NA CAGUGUUACAGCUCUUUUAGAAUUUGUCUAGUAGGCUUUCUGGCUUUUUACCGGAAAGCCCCU
modified H2a pre-mRNA y 60 NA CCAAAGGCUCUUUUCAGAGCCACCCACUGAAUCAGAUAAAGAGCUGUAACACGGUAGCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-02-10
Deposition Author(s): Desotell, A. , Tong, L.