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FASTA Sequence PDB Format mmCIF Format
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9N8F

Cryo-em structure of sudv glycoprotein with modified hr1c (l579p) and hr2 stalk bound to ca45 fab

PDB DOI: 10.2210/pdb9n8f/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000)

Deposited: 2025-02-08
Deposition Author(s): Lee, Y.Z. , Ward, A.B. , Zhu, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.13 Å

9n8f
Literature

Cryo-em structure of sudv glycoprotein with modified hr1c (l579p) and hr2 stalk bound to ca45 fab

Lee, Y.Z. , Ward, A.B. , Zhu, J.

Primary Citation of Related Structures: 9N8F


Proteins
Molecule Chains Sequence Length Organism Sequence
SUDV Gulu - GP1 A 470 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) SMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETFLQSPPIREAVNYTENTSSYYATSYLEYEIENFGAQHSTTLFKIDNNTFVRLDRPHTPQFLFQLNDTIHLHQQLSNTTGRLIWTLDANINADIGEWAFWENKKNLSEQLRGEELSFEALSLNETEDDDAASSRITKGRISDRATRKYSDLVPKNSPGMVPLHIPEGETTLPSQNSTEGRRVGVNTQETITETAATIIGTNGNHMQISTIGIRPSSSQIPSSSPTTAPSPEAQTPTTHTSGPSVMATEEPTTPPGSSPGPTTEAPTLTTPENITTAVKTVLPQESTSNGLITSTVTGILGSLGLRKRSRR
SUDV Gulu - GP1 C 470 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) SMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETFLQSPPIREAVNYTENTSSYYATSYLEYEIENFGAQHSTTLFKIDNNTFVRLDRPHTPQFLFQLNDTIHLHQQLSNTTGRLIWTLDANINADIGEWAFWENKKNLSEQLRGEELSFEALSLNETEDDDAASSRITKGRISDRATRKYSDLVPKNSPGMVPLHIPEGETTLPSQNSTEGRRVGVNTQETITETAATIIGTNGNHMQISTIGIRPSSSQIPSSSPTTAPSPEAQTPTTHTSGPSVMATEEPTTPPGSSPGPTTEAPTLTTPENITTAVKTVLPQESTSNGLITSTVTGILGSLGLRKRSRR
SUDV Gulu - GP1 B 470 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) SMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETFLQSPPIREAVNYTENTSSYYATSYLEYEIENFGAQHSTTLFKIDNNTFVRLDRPHTPQFLFQLNDTIHLHQQLSNTTGRLIWTLDANINADIGEWAFWENKKNLSEQLRGEELSFEALSLNETEDDDAASSRITKGRISDRATRKYSDLVPKNSPGMVPLHIPEGETTLPSQNSTEGRRVGVNTQETITETAATIIGTNGNHMQISTIGIRPSSSQIPSSSPTTAPSPEAQTPTTHTSGPSVMATEEPTTPPGSSPGPTTEAPTLTTPENITTAVKTVLPQESTSNGLITSTVTGILGSLGLRKRSRR
SUDV Gulu - GP2 D 165 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) QTNTKATGKCNPNLHYWTAQEQHNAAGIAWIPYFGPGAEGIYTEGLMHNQNALVCGLRQLANETTQALQLFLRATTEPRTYTILNRKAIDFLLRRWGGTCRILGPDCCIEPHDLTKNITDKINQIIHDFIDNPLPNASGYIPEAPRDGQAYVRKDGEWVLLSTFL
SUDV Gulu - GP2 E 165 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) QTNTKATGKCNPNLHYWTAQEQHNAAGIAWIPYFGPGAEGIYTEGLMHNQNALVCGLRQLANETTQALQLFLRATTEPRTYTILNRKAIDFLLRRWGGTCRILGPDCCIEPHDLTKNITDKINQIIHDFIDNPLPNASGYIPEAPRDGQAYVRKDGEWVLLSTFL
SUDV Gulu - GP2 F 165 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) QTNTKATGKCNPNLHYWTAQEQHNAAGIAWIPYFGPGAEGIYTEGLMHNQNALVCGLRQLANETTQALQLFLRATTEPRTYTILNRKAIDFLLRRWGGTCRILGPDCCIEPHDLTKNITDKINQIIHDFIDNPLPNASGYIPEAPRDGQAYVRKDGEWVLLSTFL
CA45 Fab heavy chain H 236 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT
CA45 Fab heavy chain I 236 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT
CA45 Fab heavy chain J 236 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT
CA45 Fab light chain L 215 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
CA45 Fab light chain M 215 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
CA45 Fab light chain N 215 Homo Sapiens , Sudan Ebolavirus (Strain Human/Uganda/Gulu/2000) DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-02-08
Deposition Author(s): Lee, Y.Z. , Ward, A.B. , Zhu, J.