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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9ML1

D24.1m01 fab bound to hpv16 l1 pentamer

PDB DOI: 10.2210/pdb9ml1/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Papillomavirus 16

Deposited: 2024-12-18
Deposition Author(s): Hurlburt, N.K. , Pancera, M. , Rodarte, J.V. , Singh, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

9ml1
Literature

D24.1m01 fab bound to hpv16 l1 pentamer

Hurlburt, N.K. , Pancera, M. , Rodarte, J.V. , Singh, S.

Primary Citation of Related Structures: 9ML1


Proteins
Molecule Chains Sequence Length Organism Sequence
Major capsid protein L1 A 426 Homo Sapiens , Human Papillomavirus 16 AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 B 426 Homo Sapiens , Human Papillomavirus 16 AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 C 426 Homo Sapiens , Human Papillomavirus 16 AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 D 426 Homo Sapiens , Human Papillomavirus 16 AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 E 426 Homo Sapiens , Human Papillomavirus 16 AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
D24.1M01 Heavy Chain H 235 Homo Sapiens , Human Papillomavirus 16 QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain M 235 Homo Sapiens , Human Papillomavirus 16 QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain O 235 Homo Sapiens , Human Papillomavirus 16 QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain Q 235 Homo Sapiens , Human Papillomavirus 16 QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain S 235 Homo Sapiens , Human Papillomavirus 16 QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Light Chain L 217 Homo Sapiens , Human Papillomavirus 16 QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain N 217 Homo Sapiens , Human Papillomavirus 16 QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain P 217 Homo Sapiens , Human Papillomavirus 16 QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain R 217 Homo Sapiens , Human Papillomavirus 16 QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain T 217 Homo Sapiens , Human Papillomavirus 16 QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-12-18
Deposition Author(s): Hurlburt, N.K. , Pancera, M. , Rodarte, J.V. , Singh, S.