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FASTA Sequence PDB Format mmCIF Format
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9ML1

D24.1m01 fab bound to hpv16 l1 pentamer

PDB DOI: 10.2210/pdb9ml1/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri

Deposited: 2024-12-18
Deposition Author(s): Hurlburt, N.K. , Pancera, M. , Rodarte, J.V. , Singh, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

Literature

D24.1m01 fab bound to hpv16 l1 pentamer

Hurlburt, N.K. , Pancera, M. , Rodarte, J.V. , Singh, S.

Primary Citation of Related Structures: 9ML1


Proteins
Molecule Chains Sequence Length Organism Sequence
Major capsid protein L1 A 426 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 B 426 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 C 426 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 D 426 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
Major capsid protein L1 E 426 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri AVVSTDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPNNNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLGVGISGHPLLNKLDDTENASAYAANAGVDNRECISMDYKQTQLCLIGCKPPIGEHWGKGSPCTNVAVNPGDCPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEVPLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGTVGENVPDDLYIKGSGSTANLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWGNQLFVTVVDTTRSTNMSLCAAISTSETTYKNTNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSMNSTILEDWNGGSGAEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGL
D24.1M01 Heavy Chain H 235 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain M 235 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain O 235 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain Q 235 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Heavy Chain S 235 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QVTLRESGPALVKPTQTLTLTCTISGLSLTTSGVCVSWIRQPPGKALEWLALIDWDDDKYYSTSLRTRLTISKDISKNQVVLTMTNMDPVDTATFFCARTRCTSNWGYYFDSWGRGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
D24.1M01 Light Chain L 217 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain N 217 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain P 217 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain R 217 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
D24.1M01 Light Chain T 217 Salmonella Enterica , Xanthomonas Axonopodis Pv. Citri QSVLTQPPSVSGAPGQRVTISCTGSASNIGAGYDVHWYQQVPGAAPKLLIFVYSNRPSGVPDRISGSKSGTSASLAISGLQAEDEADYYCQSYDDSLRGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-12-18
Deposition Author(s): Hurlburt, N.K. , Pancera, M. , Rodarte, J.V. , Singh, S.