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9MID

Crystal structure of the vrc01-class antibody 3g08, derived from gt1.1 vaccination, in complex with eod-gt8

PDB DOI: 10.2210/pdb9mid/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2024-12-12
Deposition Author(s): Agrawal, S. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.74 Å

9mid
Literature

Crystal structure of the vrc01-class antibody 3g08, derived from gt1.1 vaccination, in complex with eod-gt8

Agrawal, S. , Wilson, I.A.

Primary Citation of Related Structures: 9MID


Proteins
Molecule Chains Sequence Length Organism Sequence
3G08 Fab Heavy Chain H 223 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLVQSGAEVKKPGASVKVSCKASGYTFTGHYMHWVRQAPGQGLEWMGWINPYSSGTNYAQNFQGRVTMTRDTSITTAYMELSRLRSDDTAVYYCARAPDYGDRWDFDYWGQGTLVTVFNQIKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
3G08 Fab Light Chain L 211 Homo Sapiens , Human Immunodeficiency Virus 1 QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKVIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQADDEADYYCSSYEVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
eOD-GT8 engineered mutant of gp120 C 183 Homo Sapiens , Human Immunodeficiency Virus 1 DTITLPCRPAPPPHCSSNITGLILTRQGGYSNANTVIFRPSGGDWRDIARCQIAGTVVSTQLFLNGSLAEEEVVIRSEDWRDNAKSICVQLATSVEIACTGAGHCAISRAKWANTLKQIASKLREQYGAKTIIFKPSSGGDPEFVNHSFNCGGEFFYCASTQLFASTWFASTGTGTKHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-12-12
Deposition Author(s): Agrawal, S. , Wilson, I.A.