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FASTA Sequence PDB Format mmCIF Format
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9M0E

Enhancing the synthesis efficiency of galacto-oligosaccharides of a beta-galactosidase from paenibacillus barengoltzii by engineering the active and distal sites

PDB DOI: 10.2210/pdb9m0e/pdb

Classification: HYDROLASE
Organism(s): Paenibacillus Barengoltzii

Deposited: 2025-02-24
Deposition Author(s): Liu, X. , Wang, Y.L. , Xin, F.J. , Yang, Z.S. , Yu, H.Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.8 Å

9m0e
Literature

Enhancing the synthesis efficiency of galacto-oligosaccharides of a beta-galactosidase from paenibacillus barengoltzii by engineering the active and distal sites

Liu, X. , Wang, Y.L. , Xin, F.J. , Yang, Z.S. , Yu, H.Y.

Primary Citation of Related Structures: 9M0E


Proteins
Molecule Chains Sequence Length Organism Sequence
Beta-galactosidase A 1014 Paenibacillus Barengoltzii MELNREWENLSCLHIGRLPARASYIPYESAMTARTGKRGRSPHVQTLNGNWKFRYYRSVREVDSHFYETETDVSGWDDLIVPSCWQTNGYDQLHYTNVNYPIPYDPPFVPDDNPAGTYVRDFNLPEAWTKKQTRIVFEGVNACFYLWVNGRFVGYSQGSRIPAEFDLTPFVAAGRNRLAVLVLKWCDGTYLEDQDVWRFSGIYRDVYLLSRDNTHIRDVFNQPLLSDDLSEGKLRSEIETTGSLTIQAELRDPAGKLIGQKEAQIDGKGAMELDVPQPQLWNAEQPRLYELILTAGQEVLRFRVGFKKVEITDGIFRINGRAVKLKGVNRHDSHPELGQTIPVNHMIADLKLMKRHNINTIRTSHYPNDPKFLDLCDEFGFYIIDEADLECHGVTRTGELEAGAFHKLSNNPDWKEAFVERAVRMVERDKNHASVIIWSMGNESGYGDNHIAMAEWTKARDASRLVHYEGADPRYYSNSDTSCLDLDSRMYPSVKEIERYALDENSTKPLFLCEYSHAMGNGPGDLQDYWNVIYRYPKLMGGCVWEWCDHGIAAETPDGQRYYAYGGDFGDQPNDRNFCIDGLVFPDRRPHTGLLELKQVIAPVLIEAEDVAQGRFRVLNRYDFSNLSHLAVSWKLEQEGDVLQQGRSGLLTAAPGETEIISLPYDLTVAQEEGTGPLTLTCSVRQQLDTPWAEEGYEIAFYQFELPGATSALAHEKLQSEEYAGFMTIDEQDGMLTVRGFDFEHVFDLKKGMPQQVSKHGVPLLASLARFNIWRAPMDNDMNIRKEWEAAGLDHAAMKVYRSHWEQKPDASVEIHVDFSLASYIFEPFVRGNAVWTVGVSGEIQLKVHAEVRENLPFLPRFGLELTMPKGTEEIEYYGYGPHESYIDKRASVRKGKYLLSVDDMFENYVMPQETGSRYGTEWAIASTVQGMGLKFTAAQPFSFQALHYTAEDLTAAQHTYELKRRPETIVTLDYQMSGTGSGSCGPQLAEPYRFTEKSFDFELTIQPIFKEEE
Beta-galactosidase B 1014 Paenibacillus Barengoltzii MELNREWENLSCLHIGRLPARASYIPYESAMTARTGKRGRSPHVQTLNGNWKFRYYRSVREVDSHFYETETDVSGWDDLIVPSCWQTNGYDQLHYTNVNYPIPYDPPFVPDDNPAGTYVRDFNLPEAWTKKQTRIVFEGVNACFYLWVNGRFVGYSQGSRIPAEFDLTPFVAAGRNRLAVLVLKWCDGTYLEDQDVWRFSGIYRDVYLLSRDNTHIRDVFNQPLLSDDLSEGKLRSEIETTGSLTIQAELRDPAGKLIGQKEAQIDGKGAMELDVPQPQLWNAEQPRLYELILTAGQEVLRFRVGFKKVEITDGIFRINGRAVKLKGVNRHDSHPELGQTIPVNHMIADLKLMKRHNINTIRTSHYPNDPKFLDLCDEFGFYIIDEADLECHGVTRTGELEAGAFHKLSNNPDWKEAFVERAVRMVERDKNHASVIIWSMGNESGYGDNHIAMAEWTKARDASRLVHYEGADPRYYSNSDTSCLDLDSRMYPSVKEIERYALDENSTKPLFLCEYSHAMGNGPGDLQDYWNVIYRYPKLMGGCVWEWCDHGIAAETPDGQRYYAYGGDFGDQPNDRNFCIDGLVFPDRRPHTGLLELKQVIAPVLIEAEDVAQGRFRVLNRYDFSNLSHLAVSWKLEQEGDVLQQGRSGLLTAAPGETEIISLPYDLTVAQEEGTGPLTLTCSVRQQLDTPWAEEGYEIAFYQFELPGATSALAHEKLQSEEYAGFMTIDEQDGMLTVRGFDFEHVFDLKKGMPQQVSKHGVPLLASLARFNIWRAPMDNDMNIRKEWEAAGLDHAAMKVYRSHWEQKPDASVEIHVDFSLASYIFEPFVRGNAVWTVGVSGEIQLKVHAEVRENLPFLPRFGLELTMPKGTEEIEYYGYGPHESYIDKRASVRKGKYLLSVDDMFENYVMPQETGSRYGTEWAIASTVQGMGLKFTAAQPFSFQALHYTAEDLTAAQHTYELKRRPETIVTLDYQMSGTGSGSCGPQLAEPYRFTEKSFDFELTIQPIFKEEE
Beta-galactosidase C 1014 Paenibacillus Barengoltzii MELNREWENLSCLHIGRLPARASYIPYESAMTARTGKRGRSPHVQTLNGNWKFRYYRSVREVDSHFYETETDVSGWDDLIVPSCWQTNGYDQLHYTNVNYPIPYDPPFVPDDNPAGTYVRDFNLPEAWTKKQTRIVFEGVNACFYLWVNGRFVGYSQGSRIPAEFDLTPFVAAGRNRLAVLVLKWCDGTYLEDQDVWRFSGIYRDVYLLSRDNTHIRDVFNQPLLSDDLSEGKLRSEIETTGSLTIQAELRDPAGKLIGQKEAQIDGKGAMELDVPQPQLWNAEQPRLYELILTAGQEVLRFRVGFKKVEITDGIFRINGRAVKLKGVNRHDSHPELGQTIPVNHMIADLKLMKRHNINTIRTSHYPNDPKFLDLCDEFGFYIIDEADLECHGVTRTGELEAGAFHKLSNNPDWKEAFVERAVRMVERDKNHASVIIWSMGNESGYGDNHIAMAEWTKARDASRLVHYEGADPRYYSNSDTSCLDLDSRMYPSVKEIERYALDENSTKPLFLCEYSHAMGNGPGDLQDYWNVIYRYPKLMGGCVWEWCDHGIAAETPDGQRYYAYGGDFGDQPNDRNFCIDGLVFPDRRPHTGLLELKQVIAPVLIEAEDVAQGRFRVLNRYDFSNLSHLAVSWKLEQEGDVLQQGRSGLLTAAPGETEIISLPYDLTVAQEEGTGPLTLTCSVRQQLDTPWAEEGYEIAFYQFELPGATSALAHEKLQSEEYAGFMTIDEQDGMLTVRGFDFEHVFDLKKGMPQQVSKHGVPLLASLARFNIWRAPMDNDMNIRKEWEAAGLDHAAMKVYRSHWEQKPDASVEIHVDFSLASYIFEPFVRGNAVWTVGVSGEIQLKVHAEVRENLPFLPRFGLELTMPKGTEEIEYYGYGPHESYIDKRASVRKGKYLLSVDDMFENYVMPQETGSRYGTEWAIASTVQGMGLKFTAAQPFSFQALHYTAEDLTAAQHTYELKRRPETIVTLDYQMSGTGSGSCGPQLAEPYRFTEKSFDFELTIQPIFKEEE
Beta-galactosidase D 1014 Paenibacillus Barengoltzii MELNREWENLSCLHIGRLPARASYIPYESAMTARTGKRGRSPHVQTLNGNWKFRYYRSVREVDSHFYETETDVSGWDDLIVPSCWQTNGYDQLHYTNVNYPIPYDPPFVPDDNPAGTYVRDFNLPEAWTKKQTRIVFEGVNACFYLWVNGRFVGYSQGSRIPAEFDLTPFVAAGRNRLAVLVLKWCDGTYLEDQDVWRFSGIYRDVYLLSRDNTHIRDVFNQPLLSDDLSEGKLRSEIETTGSLTIQAELRDPAGKLIGQKEAQIDGKGAMELDVPQPQLWNAEQPRLYELILTAGQEVLRFRVGFKKVEITDGIFRINGRAVKLKGVNRHDSHPELGQTIPVNHMIADLKLMKRHNINTIRTSHYPNDPKFLDLCDEFGFYIIDEADLECHGVTRTGELEAGAFHKLSNNPDWKEAFVERAVRMVERDKNHASVIIWSMGNESGYGDNHIAMAEWTKARDASRLVHYEGADPRYYSNSDTSCLDLDSRMYPSVKEIERYALDENSTKPLFLCEYSHAMGNGPGDLQDYWNVIYRYPKLMGGCVWEWCDHGIAAETPDGQRYYAYGGDFGDQPNDRNFCIDGLVFPDRRPHTGLLELKQVIAPVLIEAEDVAQGRFRVLNRYDFSNLSHLAVSWKLEQEGDVLQQGRSGLLTAAPGETEIISLPYDLTVAQEEGTGPLTLTCSVRQQLDTPWAEEGYEIAFYQFELPGATSALAHEKLQSEEYAGFMTIDEQDGMLTVRGFDFEHVFDLKKGMPQQVSKHGVPLLASLARFNIWRAPMDNDMNIRKEWEAAGLDHAAMKVYRSHWEQKPDASVEIHVDFSLASYIFEPFVRGNAVWTVGVSGEIQLKVHAEVRENLPFLPRFGLELTMPKGTEEIEYYGYGPHESYIDKRASVRKGKYLLSVDDMFENYVMPQETGSRYGTEWAIASTVQGMGLKFTAAQPFSFQALHYTAEDLTAAQHTYELKRRPETIVTLDYQMSGTGSGSCGPQLAEPYRFTEKSFDFELTIQPIFKEEE
Beta-galactosidase E 1014 Paenibacillus Barengoltzii MELNREWENLSCLHIGRLPARASYIPYESAMTARTGKRGRSPHVQTLNGNWKFRYYRSVREVDSHFYETETDVSGWDDLIVPSCWQTNGYDQLHYTNVNYPIPYDPPFVPDDNPAGTYVRDFNLPEAWTKKQTRIVFEGVNACFYLWVNGRFVGYSQGSRIPAEFDLTPFVAAGRNRLAVLVLKWCDGTYLEDQDVWRFSGIYRDVYLLSRDNTHIRDVFNQPLLSDDLSEGKLRSEIETTGSLTIQAELRDPAGKLIGQKEAQIDGKGAMELDVPQPQLWNAEQPRLYELILTAGQEVLRFRVGFKKVEITDGIFRINGRAVKLKGVNRHDSHPELGQTIPVNHMIADLKLMKRHNINTIRTSHYPNDPKFLDLCDEFGFYIIDEADLECHGVTRTGELEAGAFHKLSNNPDWKEAFVERAVRMVERDKNHASVIIWSMGNESGYGDNHIAMAEWTKARDASRLVHYEGADPRYYSNSDTSCLDLDSRMYPSVKEIERYALDENSTKPLFLCEYSHAMGNGPGDLQDYWNVIYRYPKLMGGCVWEWCDHGIAAETPDGQRYYAYGGDFGDQPNDRNFCIDGLVFPDRRPHTGLLELKQVIAPVLIEAEDVAQGRFRVLNRYDFSNLSHLAVSWKLEQEGDVLQQGRSGLLTAAPGETEIISLPYDLTVAQEEGTGPLTLTCSVRQQLDTPWAEEGYEIAFYQFELPGATSALAHEKLQSEEYAGFMTIDEQDGMLTVRGFDFEHVFDLKKGMPQQVSKHGVPLLASLARFNIWRAPMDNDMNIRKEWEAAGLDHAAMKVYRSHWEQKPDASVEIHVDFSLASYIFEPFVRGNAVWTVGVSGEIQLKVHAEVRENLPFLPRFGLELTMPKGTEEIEYYGYGPHESYIDKRASVRKGKYLLSVDDMFENYVMPQETGSRYGTEWAIASTVQGMGLKFTAAQPFSFQALHYTAEDLTAAQHTYELKRRPETIVTLDYQMSGTGSGSCGPQLAEPYRFTEKSFDFELTIQPIFKEEE
Beta-galactosidase F 1014 Paenibacillus Barengoltzii MELNREWENLSCLHIGRLPARASYIPYESAMTARTGKRGRSPHVQTLNGNWKFRYYRSVREVDSHFYETETDVSGWDDLIVPSCWQTNGYDQLHYTNVNYPIPYDPPFVPDDNPAGTYVRDFNLPEAWTKKQTRIVFEGVNACFYLWVNGRFVGYSQGSRIPAEFDLTPFVAAGRNRLAVLVLKWCDGTYLEDQDVWRFSGIYRDVYLLSRDNTHIRDVFNQPLLSDDLSEGKLRSEIETTGSLTIQAELRDPAGKLIGQKEAQIDGKGAMELDVPQPQLWNAEQPRLYELILTAGQEVLRFRVGFKKVEITDGIFRINGRAVKLKGVNRHDSHPELGQTIPVNHMIADLKLMKRHNINTIRTSHYPNDPKFLDLCDEFGFYIIDEADLECHGVTRTGELEAGAFHKLSNNPDWKEAFVERAVRMVERDKNHASVIIWSMGNESGYGDNHIAMAEWTKARDASRLVHYEGADPRYYSNSDTSCLDLDSRMYPSVKEIERYALDENSTKPLFLCEYSHAMGNGPGDLQDYWNVIYRYPKLMGGCVWEWCDHGIAAETPDGQRYYAYGGDFGDQPNDRNFCIDGLVFPDRRPHTGLLELKQVIAPVLIEAEDVAQGRFRVLNRYDFSNLSHLAVSWKLEQEGDVLQQGRSGLLTAAPGETEIISLPYDLTVAQEEGTGPLTLTCSVRQQLDTPWAEEGYEIAFYQFELPGATSALAHEKLQSEEYAGFMTIDEQDGMLTVRGFDFEHVFDLKKGMPQQVSKHGVPLLASLARFNIWRAPMDNDMNIRKEWEAAGLDHAAMKVYRSHWEQKPDASVEIHVDFSLASYIFEPFVRGNAVWTVGVSGEIQLKVHAEVRENLPFLPRFGLELTMPKGTEEIEYYGYGPHESYIDKRASVRKGKYLLSVDDMFENYVMPQETGSRYGTEWAIASTVQGMGLKFTAAQPFSFQALHYTAEDLTAAQHTYELKRRPETIVTLDYQMSGTGSGSCGPQLAEPYRFTEKSFDFELTIQPIFKEEE
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-02-24
Deposition Author(s): Liu, X. , Wang, Y.L. , Xin, F.J. , Yang, Z.S. , Yu, H.Y.