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9LRW

Cryo-em structure of fission yeast centromeric nucleosome class 2

PDB DOI: 10.2210/pdb9lrw/pdb

Classification: NUCLEAR PROTEIN/DNA
Organism(s): Schizosaccharomyces Pombe (Strain 972 / Atcc 24843)

Deposited: 2025-02-01
Deposition Author(s): Xiong, Y. , Zang, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.04 Å

9lrw
Literature

Cryo-em structure of fission yeast centromeric nucleosome class 2

Xiong, Y. , Zang, J.

Primary Citation of Related Structures: 9LRW


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3-like centromeric protein cnp1 A 120 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MAKKSLMAEPGDPIPRPRKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRGA
Histone H3-like centromeric protein cnp1 E 120 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MAKKSLMAEPGDPIPRPRKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRGA
Histone H4 B 103 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISALVYEETRAVLKLFLENVIRDAVTYTEHAKRKTVTSLDVVYSLKRQGRTIYGFGG
Histone H4 F 103 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISALVYEETRAVLKLFLENVIRDAVTYTEHAKRKTVTSLDVVYSLKRQGRTIYGFGG
Histone H2A-alpha C 132 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MSGGKSGGKAAVAKSAQSRSAKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVVPNINAHLLPKTSGRTGKPSQEL
Histone H2A-alpha G 132 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MSGGKSGGKAAVAKSAQSRSAKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVVPNINAHLLPKTSGRTGKPSQEL
Histone H2B-alpha D 126 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MSAAEKKPASKAPAGKAPRDTMKSADKKRGKNRKETYSSYIYKVLKQVHPDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVRLILPGELAKHAVTEGTKSVTKYSSSAQ
Histone H2B-alpha H 126 Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) MSAAEKKPASKAPAGKAPRDTMKSADKKRGKNRKETYSSYIYKVLKQVHPDTGISNQAMRILNSFVNDIFERIATEASKLAAYNKKSTISSREIQTAVRLILPGELAKHAVTEGTKSVTKYSSSAQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (140-MER) i 147 NA ATCGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCACATATATACATCCGAT
DNA (140-MER) j 147 NA ATCGGATGTATATATGTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-02-01
Deposition Author(s): Xiong, Y. , Zang, J.