9LJF
Cryo-em structure of the dgtp bound drt2-ncrna complex
PDB DOI: 10.2210/pdb9ljf/pdb
Classification: ANTIVIRAL PROTEIN/RNA/DNA Organism(s): Klebsiella Pneumoniae
Deposited: 2025-01-15 Deposition Author(s): Jia, N. , Qing, H. , Xia, Y.S. , Zhang, J.T.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.52 Å
Cryo-em structure of the dgtp bound drt2-ncrna complex
Jia, N. , Qing, H. , Xia, Y.S. , Zhang, J.T.
Primary Citation of Related Structures: 9LJF
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA-dependent DNA polymerase | A | 425 | Klebsiella Pneumoniae | MNNDDYPWFRKRGYLHFDEPVSLKKAVKYVSSPEKIIKHSFLPFLSFEVKSFKIKKDKSTKQLSKTEKLRPIAYSSHLDSHIYAFYAEYLTGHYELLIQENNLHENILAFRSLNKSNIEFAKRAFDTITEMGECSAVALDLSGFFDNLDHQILKHQWCKVIGTEALPQDHFAIYKSITRYSKVDKNRAYEILGISKNNPKYNRRKICTPVDFRNKIRKNGLIIVNNSQKGIPQGSPISALLSNIYMLDFDIEMRDYAQERGGHYYRYCDDMLFIVPTKYNKTLAGDVAQRIKHLKVELNTKKTEIRDFIYKDSTLVANMPLQYLGFIFDGSNILLRSSSLARYSERMKRGVRLAKATMDSKNRIRENKGEALKALFKKKLYARYSHIGRRNFLTYGYRAAKIMNSKAIKRQLKPLQKRLENEILK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (280-MER) | b | 280 | NA | GCCCUAAACAAAGGUUUAGGGGUAUUGUACAGGUUGUCAAGCCUCCCACAGGUCUUGGUGAAACCAAUCACUGUGACGACGGUAAGCAACACUUGGAUGAUAUUCAUAAUUGACUCCACGCUACUGAUUACAUUAUACAGCAUAUCUAACAUUUGCGGCGAGGUUCACAAUUUGUAUUUAGGUACUGAUUGUGGAUGAGAAGGUUGGAGAAAGACCACUUGGUUAAGCCGGAGGAUGUGUCCUAGAAUUGUCGCUAUUCUGUCAUCCUCCGGUUUUGCUA |
| DNA (5'-D(P*GP*AP*TP*AP*T)-3') | c | 5 | NA | GATAT |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2025-01-15 Deposition Author(s): Jia, N. , Qing, H. , Xia, Y.S. , Zhang, J.T.