Complex structure of thc-2199 fab bound to sars-cov-2 xbb.1.5 rbd
PDB DOI: 10.2210/pdb9lfo/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2025-01-08 Deposition Author(s): Guo, F. , Wang, X.
Method: X-RAY DIFFRACTION Resolution: 2.91 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike protein S1 | C | 219 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | RVQPTESIVRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNK |
| Spike protein S1 | F | 219 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | RVQPTESIVRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNK |
| THC-2199 Heavy chain | A | 232 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGGVVQPGGSLRLSCSASGFTFKSYSMNWFRQAPGKGLEWVSYIGSFSSTIYYADSVKGRFIISRDNAQSSLYLQMNSLRVEDTGVYYCVKEEVLELRRTHPYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
| THC-2199 Heavy chain | D | 232 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVQLVESGGGVVQPGGSLRLSCSASGFTFKSYSMNWFRQAPGKGLEWVSYIGSFSSTIYYADSVKGRFIISRDNAQSSLYLQMNSLRVEDTGVYYCVKEEVLELRRTHPYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
| THC-2199 Light chain | B | 219 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | DIVMTQTPLSSPVTLGQPASISCRSSQSLVDSDGNTYLNWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQATQFPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| THC-2199 Light chain | E | 219 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | DIVMTQTPLSSPVTLGQPASISCRSSQSLVDSDGNTYLNWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQATQFPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Method: X-RAY DIFFRACTION