PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9LCK

Cryo-em structure of influenza polymerase bound to crna promoter

PDB DOI: 10.2210/pdb9lck/pdb

Classification: VIRAL PROTEIN/RNA
Organism(s): Influenza A Virus (Strain A/Goose/Guangdong/1/1996 H5N1 Genotype Gs/Gd) , Synthetic Construct

Deposited: 2025-01-04
Deposition Author(s): Liang, H.H. , Wu, Y.X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.98 Å

9lck
Literature

Cryo-em structure of influenza polymerase bound to crna promoter

Liang, H.H. , Wu, Y.X.

Primary Citation of Related Structures: 9LCK


Proteins
Molecule Chains Sequence Length Organism Sequence
Polymerase acidic protein A 716 Influenza A Virus (Strain A/Goose/Guangdong/1/1996 H5N1 Genotype Gs/Gd) , Synthetic Construct MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDFHFIDERGESTIIESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFIEIGVTRREVHTYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMCRLADQSLPPNFSSLEKFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLRLPDGPPCSQRSKFLLMDALKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLLAWKQVLAELQDIENEEKIPKTKNMRKTSQLKWALGENMAPEKVDFEDCKDVSDLRQYDSDEPKPRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPKGMEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWVLLNASWFNSFLTHALK
RNA-directed RNA polymerase catalytic subunit B 757 Influenza A Virus (Strain A/Goose/Guangdong/1/1996 H5N1 Genotype Gs/Gd) , Synthetic Construct MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEKSHPGIFENSCLETMEIVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKGEMEIITHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRSYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSFTITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNVLSIAPIMFSNKMARLGKGYMFESKSMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLGVSILNLGQKRYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINRTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLGPATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWEQTRSKAGLLVSDGGPNLYNIRNLHIPEVCLKWELMDEDYQGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGRIKKEEFAEIMKICSTIEELRRQK
PB2-S1 C 43 Influenza A Virus (Strain A/Goose/Guangdong/1/1996 H5N1 Genotype Gs/Gd) , Synthetic Construct KRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
3'-cRNA d 9 NA AACACCCUU
5'-cRNA e 18 NA AGCAAAAGCAGGGUGUUU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-01-04
Deposition Author(s): Liang, H.H. , Wu, Y.X.