Cryo-em structure of bacteriophage t1 tail tip complex
PDB DOI: 10.2210/pdb9l9p/pdb
Classification: VIRAL PROTEIN Organism(s): Escherichia Phage T1
Deposited: 2024-12-30 Deposition Author(s): Chen, Y. , Liu, H.R.
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Putative tail fiber protein | S | 1172 | Escherichia Phage T1 | MIQKVISGSKGGSQKPHNPVEMEDNLISINKIKILLAVSDGEIDETFSLKQLMFNSVPVQNEDGSFNFEGVKAEFRPGTQTQEYIKGMEDSSSEVTVNREVTTDNPYTISVTNKTLSAIRIKMFMPRGVRIESNGDKNGVRVEYEVQQAVDGGSFETVLTDVIEGKTMSGYDRSRRVNLPNFNNQVIFRVVRKTPDSNDSNVVDAIQVKSYAEVIDAKFRYPLTGLLFVEFDSKMFPNQLPTISIRKRWKIVNVPSNYDPESRTYNGNWDGTFKKAWTNNPAWVLYDLMINQRYGLDQKELGIAVDKWALYEAAQYCDQMVPDGKGGTEPRYLCDVIIQSQTDAYKVIRDICSIFRGMSFWNGESISVIIDRPREPAYIFTNDNVVNGDFSYTFASEKSMYTTCNVMFDDEQNMYQQDVEPVFDREATLRFGNNVTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVVAIADNFWSSNLTMNLSGRLLEVSGSQIFLPFRVDARAGDFIIVNKPDGKPVKRTISSVSADGKTIEVNIGFGFPVKPNTVFAIDRTDIALQQYVVTKIDKGDDDEEFTYKITAVEYDPNKYDEIDYGVNIDDRPTSIVEPDQIPRPKNVQVSSESRIVQGMSVETMIVSWDKVPYAVFYDVQWRKDNGNWQNVPQTANKEVYVEGIYAGNYQVRVRSVAGSGTTSGWSNIVAATLTGKQGEPGRPINLTATDDVVFGIRTKWGFSDGSGDTAYTELQQSPDGTVDNASLLSLIPYPQHEYYHSPMPGGNIVWYRVRTVDRIGNVSQWTDFVRGMASTNVDDIIGEISVDIENSPGYEWLVDNATDNAAQNSANAEAAIENALANDKDAIYMKKENGKRKAEYTKSLKLIADETQARVTAIEQLKASFGDQISASNSELREVIATETEALSREIDQLKAQIGDDIQASLTDIREVIATETEALSREIDQLKAQIGDDIQASLTDIREAIANETEARTQADLTLSARLGNNEAALAQKLDSWSNADSTGAMYGVKLGLKYNGQEYSAGMAMSLVGSGAAVKAQILFEASRFAIMTGMNGQTQYPFVVENGQVILSSAIIKNGFITNAMIGNFIQSNNYVFNQSGWRLDKGGTFENYGSDGEGAMKQTNTTISVRDASGRLRVQIGRLTGSW |
| Putative tail assembly protein | A | 199 | Escherichia Phage T1 | MNDVKVIKLSGSLGRRFGVFHRYAVDSYPEAIRALSSQVDGFKEYMQSEVGSRSKFAIFVDGVNVGHHEEEKFKCAKEIRIVPIPTGSKTGGLFQVVLGAAIMVAAFYTGGASLALMGTMSSSLFMMGGAMVLGGVMQMISPQPGGANFEVQSSKNKPSYAFGGAVNTTAAGYPLPVPYGYRAGGGATFSAGSYAEDMS |
| Putative minor tail protein | J | 260 | Escherichia Phage T1 | MSENKKLYDEESGKSLFHNCLQSLYPGEIITLIEVDGSKFGAQVYRFHGENIQYTPEEIMQAQQTGTLPPKEITFRGEKYGARPFGISGISFDSSGKATKPQLTVANIDSRVSAMIRAYNGLMQAKVTIWITQRELINSDGSIADGAYRKLVYYIERPNYVDKSVARFDLTSPYDMDGIMIPSRLTQSVCYFAQRGWYKTGKGCGYNGQNGYFDKDNNPVDDPSLDFCPGTVTACRLRFGANNELDFGGCAVASLQRKNQ |
| Putative minor tail protein | H | 117 | Escherichia Phage T1 | MATLDTFGWCTQVQGGGGSLTTTNSDRSIQFGNGYMQLASSGFNTTRREYSVVYAGEDFMAVYDFCNSHRIKPFAWTPPDGKIGIWVVKPNSLGAKPVSRDVMEINVTFMEQFTSME |
| Tape measure protein | B | 957 | Escherichia Phage T1 | MVDKVAGLSLDVDVSTVQRAVKSLKEFSKANDQAADSMGSLINESEVAKQKAKEHAEQLRRQRKEYEAVEKAIDPTVSKMERLKIASQQLDKLWQQGVVPDETFFRLGEMLDLQNAKLARSRAMLTEEGQAALQEAKAKEQAAVRSKAFMDALNGQVNAIGKTHAELMELKAAELGLSKEAAPLIAKLKDQGRAMNAAGISAGEYRQAMRMLPAQITDVVTSLASGMPVWMVAIQQGGQIKDSFGGIGNTFKVLLSYINPVTAGVGVLVGSLGILAKAGYDSYKSITDIQNALIETGGYAGVTAEELDSVSKKIAQTSNSTIGSIREIVTELASSGKYTREQIQNITKATAEWSASTGKSASQIISEFEKIASDPVKGLKKLNEQYNFLEKGQLTYIDTLSRTKGETEAVSEATKLFADVMEKRMKSIADNATPLEKMWSDIKQWASDAWGWVGDHTLGALNLIIDVVQGTVIQVKMILAKGDEYISNFIASAIKATQSLPGMSDFGADVLKEQENIVKSSRDNYDQLASDLDAINARVEKGEMGYIEAMRQRRTLEKQYSEETKEAIRKEAEEIEKRNRERNKQSKIVRSPTEQFDKELISLRAQLKVLQEHKEIGQKLSAQRKALFTTEATIAVLREASSKRQLSAEEKALLASQERVIELAKQKAEIGDQIVKQQQLNDLTDKSLKFVNEMTAATEQLNASRGLSTRDMERQAELAKITTDYINSGGSEGDEKLQNMIKAQNDYYAAEDAKRADWLAGAESAFADYGDAAMDMYGNVNEIASSALNGMSDMMVQFLTTGKANFEDFAKNIIGMIIKMIAQMVIFNTISGMMGGKTWSFAGGASSGASAASQATPTPAASVFRSVSSGGAAVSLAAAAGSVATSGFNASNSAPKVVNHSGGGTVVDVSGMEVKVDNGSDPRGISQGVEMMFKKMIRESCSQGGEVYNYIQEKTGG |
Method: ELECTRON MICROSCOPY