Cryo-em structure of the d16:1 s1p-bound s1pr3 and gq complex
PDB DOI: 10.2210/pdb9l74/pdb
Classification: MEMBRANE PROTEIN Organism(s): Homo Sapiens
Deposited: 2024-12-25 Deposition Author(s): Asada, H. , Hagiwara, M. , Im, D. , Iwata, S. , Yamauchi, M.
Cryo-em structure of the d16:1 s1p-bound s1pr3 and gq complex
Asada, H. , Hagiwara, M. , Im, D. , Iwata, S. , Yamauchi, M.
Primary Citation of Related Structures: 9L74
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Engineered G-alpha-q | A | 243 | Homo Sapiens | SVSAEDKAAAERSKMIDKNLREDGEKARRTLRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNDFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRKEFVDISTASGDGRHICYPHFTCAVDTENARRIFNDCKDIILQMNLKEYNLV |
| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | B | 358 | Homo Sapiens | MHHHHHHLEVLFQGPGSSGSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN |
| scFv16 | C | 259 | Homo Sapiens | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH |
| Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | G | 71 | Homo Sapiens | MASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL |
| Nb35 | N | 129 | Homo Sapiens | MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS |
| Sphingosine 1-phosphate receptor 3 | R | 342 | Homo Sapiens | DYKDDDDKGSHHHHHHHHGSLEVLFQGPATALPPRLQPVRGQETLREHYQYVGKLAGRLKEASEGSTLTTVLFLVICSFIVLENLMVLIAIWKNNKFHNRMYFFIGNLALCDLLAGIAYKVNILMSGKKTFSLSPTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKRHRVFLLIGMCWLIAFTLGALPILGWNCLHNLPDCSTILPLYSKKYIAFCISIFTAILVTIVILYARIYFLVKSSSRKVANHNNSERSMALLRTVVIVVSVFIACWSPLFILFLIDVACRVQACPILFKAQWFIVLAVLNSAMNPVIYTLASKEMRRAFFRLVCN |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-12-25 Deposition Author(s): Asada, H. , Hagiwara, M. , Im, D. , Iwata, S. , Yamauchi, M.