9KZ9
Cryo-em structure of psi-acpi from rhodomonas sp. nies-2332 at 2.08 angstroms resolution
PDB DOI: 10.2210/pdb9kz9/pdb
Classification: PHOTOSYNTHESIS Organism(s): Rhodomonas Sp. Nies-2332
Deposited: 2024-12-10 Deposition Author(s): Akita, F. , Shen, J.R. , Zhang, W.Y.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.08 Å
Cryo-em structure of psi-acpi from rhodomonas sp. nies-2332 at 2.08 angstroms resolution
Akita, F. , Shen, J.R. , Zhang, W.Y.
Primary Citation of Related Structures: 9KZ9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ACPI-a | A | 217 | Rhodomonas Sp. Nies-2332 | MMRAVLVLATGVASASAFAPAANFAGLSTSSRAAIARGPRMQEMSEAIPFLPKPANIDASMPGYSGFDPLGFSDYYNVKWMQEAEIKHGRICMLAALGMMFPEFGTLPQFSSFSTNPLEAFYQVGPAGWGQILLFIGVLESFSYEKVFYGDSAPGDLGFDPLRMSSNAASAKHYARAEVMNGRLAMIGFSGMLHHAILTKQGPITQIVEQNFVPGAR |
| ACPI-m,f,j | M | 212 | Rhodomonas Sp. Nies-2332 | TVAAVACVASAAAFAPSAPMGVKASTRAVSKIGPRMQAMSDSVPFLKQPEALDGSMAGDVGFDPLGFSSIGDINFLREAELKHGRIAMLAAAGSIAQDIFTFPGVSKVVGTAKMTGVHDILVKQGAMGQLLLWLSFLEVFGTIALLETLDGKRAPGDFKFDPLNFSKNPETFKRYQLAEIKNGRLAMMGVGGMVHGYFITGKGPLELLGNFK |
| PsaO | O | 153 | Rhodomonas Sp. Nies-2332 | SSADMRTAVIFLAVLASASAFAPAAMPTQLGKPAAFTPSLRSARVAPSPLSVVAQSKFEVSDGTPYDLNVPLVGAASFIGWVVPTLLPSQIPLYGGKGLSTAFFASIGTNLAKFPAPPGMTDPFWLLCFIWHSGLFATMILGSIGYNGYAAKK |
| ACPI-k | K | 232 | Rhodomonas Sp. Nies-2332 | AASAFAPAALPSMARTTARSGVTMQLYKDGVMQGKGLVAVPFALAPDSLPADIPGYVGFDPLGLSTLCNLDFLREAEIKHGRVAMLAVTGSLVQDVFQFPGVDKVIGNAKMIGAHDKFIAGAHAGDTRSFAMHQIIFWVGLLEVLTMPALFETMNGGPRQPGDFKFDPLGLGKGDKLARKQLTEIKNGRLAMIGVGGMVHHYLLTGKGPLQFLAGIPNYKSCIDPHMGPLCQ |
| ACPI-s | S | 302 | Rhodomonas Sp. Nies-2332 | LTIAFSLTMRTSVLILAGVAVAQAFSPAVVSTGGLTSVRMAQAPPPASGKPLPKAKINCLEVNKKQWGIEGGAAAPGSAAPPAPKKAAVKKAAAAAGGAAVGFSGVPSQFGRPESGVYPAEPSEQTFLGMRGPRAPGHRENFGGKHTATMLAIAALLWQPVSEAGMYRMQGDGSLTKTSFNEFEVPGFGNAKKVPTIESLFPFSSKGFDASPVLFGKNSMIVVEDPRDGCGAYANSGSCHTFLDEIGDALKASPETLPRSEGKATYSFPWMYEHVRGRSRLAVSQLGATQSLSLWVSPVRVW |
| Photosystem I iron-sulfur center | C | 81 | Rhodomonas Sp. Nies-2332 | MSHSVKVYDTCIGCTQCVRACPCDVLEMVSWDGCKAGQIASAPRTEDCIGCKRCETACPTDFLSVRVYLGGETTRSMGLAY |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 734 | Rhodomonas Sp. Nies-2332 | MATKFPKFSQALAQDPATRRIWYGLATAHDLESHDGMTEENLYQKIFASHFGHLAVIFLWTSGNLFHLAWQGNFEQWVLNPLKVKPIAHAIWDPHFGQPAVKAFTKGGVSYPVNIATSGVYHWWYTIGMRSNTDLYAGSLFLLFLAGVFLFAGWLHLQPKFRPGLSWFKNNESRLNHHLSGLFGFSSLAWSAHLIHVAIPEARGQHVGWDNFTKVAPHPAGLQPFFSGNWGVYAAAPDTTNHIFGTSEGAGTAILTFLGGFHPQTQALWLTDIAHHHLAIGVVFIFAGHMYRTNWGIGHSLKEILDAHRPPGGRLGAGHKGIFETLTNSLHFQLGLALASLGVITSLVAQHMYALPSYAFIAKDYVTQSALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEQNKNNVLARILDHKEAIISHLSWVSLFLGFHTLGIYVHNDVVVAFGTPEKQILVEPVFAQWIQASSGKALYGFDVFLSSSNSVATNASSNIWLPGWLEAINSGKNSLFLPIGPGDFLIHHAIALALHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAGQFNESSTYIMGWLRDYLWLNSSPLINGYNPFGMNSLSVWSWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQARLVGLIHFTAGYIFTYAAFVIASTTGKFG |
| ACPI-h | H | 229 | Rhodomonas Sp. Nies-2332 | SMLRSAVALALVAGATAFAPGAMGPGLQLRAQGAAQRAPARAGLSSLSMAQNPMSKAVADFAESSPEFGGRGLGVTVNAERWNGRHAMFGIFAMVMTSYMKGHGLIPDADKILDVAQWGSLASVWDGAGNGISNERAIILIAHVHVLVVSVIAAVAPFGFQDTLVKEKGYTPEAPAGLIPPFKTGLTPEAELINGRLAMLGIISIVTASVFTGTPVVDTINLGMGKILY |
| Photosystem I reaction center subunit III | F | 188 | Rhodomonas Sp. Nies-2332 | MEIFFVKNWVSMLLVCSFLAFPSLAKADVAGLTPCGESKEFARRLDGSVKKLQTRLKKYEAGTPPALALQKQIDKTKNRFDRYGKAGLLCGTDGLPHLIADGRWSHSGEFVIPGLFFLYVAGWIGWVGRSYVLFARTADKPTEKEIIIDVPVALSFVSTGFIWPFSAFKEFTSGNLIVPADEITVSPR |
| Photosystem I reaction center subunit IX | J | 42 | Rhodomonas Sp. Nies-2332 | MDSNFLKYLSTAPVLFTVWLSFTASFIIEANRFFPDMLYFPM |
| Photosystem I reaction center subunit IV | E | 64 | Rhodomonas Sp. Nies-2332 | MVKRGSKVRILRKESYWYQDIGTVATIDTSGIRYPVVVRFEKVSYSGVNTNNFSLDEVVEVVAK |
| Photosystem I reaction center subunit XI | L | 153 | Rhodomonas Sp. Nies-2332 | MSQFIKPYNDDPFVGNLATPVSTSSFTKSLLSNLPAYRAGLSPLLRGVEIGLTHGYFLVGPFYKLGPLRNSDVALLSGFFSALGLIIILVACLTIYGVVSFEETEAKDQLQTAKGWRQFTSGWLVGSVGGASFAYILISNIPFLQTAGMSMLK |
| Photosystem I reaction center subunit VIII | I | 33 | Rhodomonas Sp. Nies-2332 | MTAAYLPSILVPIIGLIFPGLVMAFAFIYIEQD |
| Photosystem I reaction center subunit II | D | 141 | Rhodomonas Sp. Nies-2332 | MAETLNLQIPSPTFEGSTGGWLRAAEVEEKYAITWTSPKEQVFEMPTGGAAIMRQGENLLYLARKEQCLALATQVKNSFKITDYKVYRIFPSGEVQYLHPKDGVFPEKVNAGRVGVGNVSHSIGKNLNPAQIKFTSKSFNG |
| ACPI-g | G | 216 | Rhodomonas Sp. Nies-2332 | AKSKAIPFLDAPPALSESMPGYVGFDPLWVSSMLPDAGYVKFLQEAEIKHGRVAMLAAAGAIVQDIFTFPGVTSVIGNVKMTSVHDTFLSMEGPGKGNQAAMHQLLLWLGILEIATSVAIIQSFKGETNRAPGDFGFDPLGFSKKAGAETMALKEIKNGRLAMIGIGGMVHHYLLTGKGPLQFLGGIPNYKSCVSHPDSLLPWLIKPVGAVLPKIC |
| PsaR | R | 135 | Rhodomonas Sp. Nies-2332 | SFAMAALRCTVLLLAVASASAFVSGPATLALRSNPRAAISRGPQMYSPVPSPEGTKEVYWETKAPSSDVLGIGAGVSSGNFAASSVVALMIGGFCTGQVIPLTSDPNPLFLIGSFLLPYSWALHVAAWIQKNNGK |
| ACPI-n | N | 220 | Rhodomonas Sp. Nies-2332 | LRSVAVCACLASAAAFAPSAVLPRAATRAAALRGPSMQLYKDGKMQGKGVNIIPVFARPDSLDGTIPGDQGFDPFGFSSWVNMKFVSEAEIKHGRLAMLAFAGIMVESIGISFPGATSILGDSKDIFEIHNKAVESGAMGQILLWVGFIEACVGVPAMNEMLSGETSRMPGDFGFDPLGLGKGDKLARKQLVEVTNGRLAMLAVSGIVHHTIITGKGPLQ |
| PsaQ | Q | 233 | Rhodomonas Sp. Nies-2332 | YVALAAASAEAFSSPALSGLKMSAEPTQISRKDLLSTAAAGIIAVPAIAGAASLDPKTGFPVQSGGRDTLCGGSASAGCQPMTQAASITDKQKTVLAGKITVAANKVPVLTAAVEKMKSGKKPKMDRDYVLRFSALYLTTLVDAMDQYCLRDANGAKAAGGAGIPKVGGFKSTLAPSSASALYGNVDSIKEDMQTIRDAAFKGDFDGVIKAAGDIQTSATAFLGQANPPIVFN |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-12-10 Deposition Author(s): Akita, F. , Shen, J.R. , Zhang, W.Y.