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FASTA Sequence PDB Format mmCIF Format
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9JWN

Cryo-em structure of frcas9 in complex with sgrna and 43-bp dsdna substrate

PDB DOI: 10.2210/pdb9jwn/pdb

Classification: DNA/RNA/HYDROLASE
Organism(s): Faecalibaculum Rodentium , Homo Sapiens

Deposited: 2024-10-10
Deposition Author(s): Chen, S.D. , Liu, S.Q. , Yang, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.89 Å

Literature

Cryo-em structure of frcas9 in complex with sgrna and 43-bp dsdna substrate

Chen, S.D. , Liu, S.Q. , Yang, M.

Primary Citation of Related Structures: 9JWN


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (13-mer) d 13 NA TGTGTATATTGCA
RNA (125-mer) b 125 NA UGCAAGACAUAGAAAUAACCUGGUUUGAGUGUCUUGUUAAUUGAAAAAUUAACAAGAUGAGUUCAAAUCAGGCUCCUAGAGAGAUCCGAACUUACCUUCAUGGCGGGCAUUGUGCCCUUUUUUUU
DNA (43-mer) c 43 NA TGCAATATACACAGGTTATTTCTATGTCTTGCAGTGAAGTGTT

Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9 A 1372 Faecalibaculum Rodentium , Homo Sapiens MCTKESEKLNKNADYYIGLDMGTSSAGWAVSDSEYNLIRRKGKDLWGVRQFEEAKTAAERRGFRVARRRKQRQQVRNRLLSEEFQNEITKIDSGFLKRMEDSRFVISDKRVPEKYTLFNDSGYTDVEYYNQYPTIYHLRKALIESNERFDIRLVFLGIHSLFQHPGHFLDKGDVDTDNTGPEELIQFLEDCMNEIQISIPLVSNQKVLTDILTDSRITRRDKEQQILEILQPNKESKKAVSQFVKVLTGQKAKLGDLIMMEDKDTEEYKYSFSFREKTLEEILPDIEGVIDGLALEYIESIYSLYSWSLLNSYMKDTLTGHYYSYLAEARVAAYDKHHSDLVKLKTLFREYIPEEYDNFFRKMEKANYSHYIGSTEYDGEKRCRTAKAKQEDFYKSINKMLEKIPECSEKTEIQKEIIEGTFLLKQTGPQNGFVPNQLQLKELRKILQNASKHYPFLTEKDERDMTAIDRIEALFSFRIPYYIGPLKNTDNQGHGWAVRRDGHEQIPVRPWNFEEIIDESASADLFIKNLVNSCTYLRTEKVLPKSSLLYQEFEVLNELNNLRINGMYPDEIQPGLKRMIFEQCFYSGKKVTGKKLQLFLRSVLTNSSTEEFVLTGIDKDFKSSLSSYKKFCELFGVKTLNDTQKVMAEQIIEWSTVYGDSRKFLKRKLEDNYPELTDQQIRRIAGFKFSEWGNLSRAFLEMEGYKDEAGNPVTIIRALRDTQKNLMQLLSNDSAFAKKLQELNDYVTRDIWSIEPDDLDGMYLSAPVRRMIWQTFLILREVVDTIGYSPKKIFMEMARGEQEKKRTASRKKQLIDLYKEAGMKNDELFGDLESLEEAQLRSKKLYLYFRQMGRDIYSGKLIDFMDVLHGNRYDIDAIHPQSKKKDDSLENNLVLTSKDFNNHIKQDVYPIPEQIQSRQKGFWAMLLKQGFMSQEKYNRLMRTTPFTDEELAEFVNRQLVETRQGTKAIISLINQCFPDSEVVYVKAGNTSDFRQRFDIPKSRDLNNYHHAVDAYLNIVVGNVYDTKFTKNPINFIKKMRKSGNLHSYSLRRMYDFNVQRGDQTAWVAENDTTLKTVKKTAFKTSPMVTKRTYERKGGLADSVLIAAKKAKPGVHLPVKTSDSRFANQVSTYGGYDNVKGSHFFLVEHQQKKKTIRSIENVPIHLKEKLKTKEELEHYCAQVLGMVQPDVRLTRIPMYSLLLIDGYYYYLTGRTGGNLSLSNAVELCLPAKEQAHIRMISKIAGGRSTDALSAEAKDDFRKKNLRLYDELAEKHRSTIFSKRKNPIGPKLLKYREAFVKQTIENQCKVILQILKLTSTNCKTSADLKLIGGSGQEGVMSISKLLRAEKYAEFYLICQSPSGIYETRKNLLTI
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-10-10
Deposition Author(s): Chen, S.D. , Liu, S.Q. , Yang, M.