9JWN
Cryo-em structure of frcas9 in complex with sgrna and 43-bp dsdna substrate
PDB DOI: 10.2210/pdb9jwn/pdb
Classification: DNA/RNA/HYDROLASE Organism(s): Faecalibaculum Rodentium , Homo Sapiens
Deposited: 2024-10-10 Deposition Author(s): Chen, S.D. , Liu, S.Q. , Yang, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.89 Å
Cryo-em structure of frcas9 in complex with sgrna and 43-bp dsdna substrate
Chen, S.D. , Liu, S.Q. , Yang, M.
Primary Citation of Related Structures: 9JWN
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (13-mer) | d | 13 | NA | TGTGTATATTGCA |
| RNA (125-mer) | b | 125 | NA | UGCAAGACAUAGAAAUAACCUGGUUUGAGUGUCUUGUUAAUUGAAAAAUUAACAAGAUGAGUUCAAAUCAGGCUCCUAGAGAGAUCCGAACUUACCUUCAUGGCGGGCAUUGUGCCCUUUUUUUU |
| DNA (43-mer) | c | 43 | NA | TGCAATATACACAGGTTATTTCTATGTCTTGCAGTGAAGTGTT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR-associated endonuclease Cas9 | A | 1372 | Faecalibaculum Rodentium , Homo Sapiens | MCTKESEKLNKNADYYIGLDMGTSSAGWAVSDSEYNLIRRKGKDLWGVRQFEEAKTAAERRGFRVARRRKQRQQVRNRLLSEEFQNEITKIDSGFLKRMEDSRFVISDKRVPEKYTLFNDSGYTDVEYYNQYPTIYHLRKALIESNERFDIRLVFLGIHSLFQHPGHFLDKGDVDTDNTGPEELIQFLEDCMNEIQISIPLVSNQKVLTDILTDSRITRRDKEQQILEILQPNKESKKAVSQFVKVLTGQKAKLGDLIMMEDKDTEEYKYSFSFREKTLEEILPDIEGVIDGLALEYIESIYSLYSWSLLNSYMKDTLTGHYYSYLAEARVAAYDKHHSDLVKLKTLFREYIPEEYDNFFRKMEKANYSHYIGSTEYDGEKRCRTAKAKQEDFYKSINKMLEKIPECSEKTEIQKEIIEGTFLLKQTGPQNGFVPNQLQLKELRKILQNASKHYPFLTEKDERDMTAIDRIEALFSFRIPYYIGPLKNTDNQGHGWAVRRDGHEQIPVRPWNFEEIIDESASADLFIKNLVNSCTYLRTEKVLPKSSLLYQEFEVLNELNNLRINGMYPDEIQPGLKRMIFEQCFYSGKKVTGKKLQLFLRSVLTNSSTEEFVLTGIDKDFKSSLSSYKKFCELFGVKTLNDTQKVMAEQIIEWSTVYGDSRKFLKRKLEDNYPELTDQQIRRIAGFKFSEWGNLSRAFLEMEGYKDEAGNPVTIIRALRDTQKNLMQLLSNDSAFAKKLQELNDYVTRDIWSIEPDDLDGMYLSAPVRRMIWQTFLILREVVDTIGYSPKKIFMEMARGEQEKKRTASRKKQLIDLYKEAGMKNDELFGDLESLEEAQLRSKKLYLYFRQMGRDIYSGKLIDFMDVLHGNRYDIDAIHPQSKKKDDSLENNLVLTSKDFNNHIKQDVYPIPEQIQSRQKGFWAMLLKQGFMSQEKYNRLMRTTPFTDEELAEFVNRQLVETRQGTKAIISLINQCFPDSEVVYVKAGNTSDFRQRFDIPKSRDLNNYHHAVDAYLNIVVGNVYDTKFTKNPINFIKKMRKSGNLHSYSLRRMYDFNVQRGDQTAWVAENDTTLKTVKKTAFKTSPMVTKRTYERKGGLADSVLIAAKKAKPGVHLPVKTSDSRFANQVSTYGGYDNVKGSHFFLVEHQQKKKTIRSIENVPIHLKEKLKTKEELEHYCAQVLGMVQPDVRLTRIPMYSLLLIDGYYYYLTGRTGGNLSLSNAVELCLPAKEQAHIRMISKIAGGRSTDALSAEAKDDFRKKNLRLYDELAEKHRSTIFSKRKNPIGPKLLKYREAFVKQTIENQCKVILQILKLTSTNCKTSADLKLIGGSGQEGVMSISKLLRAEKYAEFYLICQSPSGIYETRKNLLTI |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-10-10 Deposition Author(s): Chen, S.D. , Liu, S.Q. , Yang, M.