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FASTA Sequence PDB Format mmCIF Format
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9JSB

Guide-bound nbasparda complexes

PDB DOI: 10.2210/pdb9jsb/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Novosphingopyxis Baekryungensis Dsm 16222

Deposited: 2024-09-30
Deposition Author(s): Zhuang, L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.93 Å

9jsb
Literature

Guide-bound nbasparda complexes

Zhuang, L.

Primary Citation of Related Structures: 9JSB


Proteins
Molecule Chains Sequence Length Organism Sequence
Ago A 485 Novosphingopyxis Baekryungensis Dsm 16222 MTFETRIFDEPELEFGDHHHHQDPRLGLSEAGPLQTFLGDVIKIGVVGNSKTIEDTRKFIETVSSGVEGKGEKHPNMHPPFPGLGNQSPYRCRFEIEDGATAALTKSKLDKIGKEPDHYRAVEMAVDEIIGELQAMDDGGSRPDVAIIALPVKLLERVWNAKVDARGTTEKSDSSGSDAPNFRGMLKAKAMGLSFPIQIVWEDVIDDKVTIPQKVKESSSRKIQDIAGRTWNLMTSLYYKGSGRIPWRRMPLEGEFSACYVGISFYREADGQQLFTSAAQMFDERGRGFVLKGRRARTESRGRHPYMAREDAKKIIEDVLAAYKLHHKTLPARVFILKTSRFKDEEADGIIAALDEAGTELRDLVWVQESYTARILRDGNYPVLRGTFVDLHGKGLLYTSGSMPYYGTYPGKYDPNPLLLCPHHTSESTVAQLAEEIFSLTKVNWNSTQMNQRLPIPIRAARKVGEVLKYVGEGEVISADYRKYI
Ago B 485 Novosphingopyxis Baekryungensis Dsm 16222 MTFETRIFDEPELEFGDHHHHQDPRLGLSEAGPLQTFLGDVIKIGVVGNSKTIEDTRKFIETVSSGVEGKGEKHPNMHPPFPGLGNQSPYRCRFEIEDGATAALTKSKLDKIGKEPDHYRAVEMAVDEIIGELQAMDDGGSRPDVAIIALPVKLLERVWNAKVDARGTTEKSDSSGSDAPNFRGMLKAKAMGLSFPIQIVWEDVIDDKVTIPQKVKESSSRKIQDIAGRTWNLMTSLYYKGSGRIPWRRMPLEGEFSACYVGISFYREADGQQLFTSAAQMFDERGRGFVLKGRRARTESRGRHPYMAREDAKKIIEDVLAAYKLHHKTLPARVFILKTSRFKDEEADGIIAALDEAGTELRDLVWVQESYTARILRDGNYPVLRGTFVDLHGKGLLYTSGSMPYYGTYPGKYDPNPLLLCPHHTSESTVAQLAEEIFSLTKVNWNSTQMNQRLPIPIRAARKVGEVLKYVGEGEVISADYRKYI
DREN-APAZ D 442 Novosphingopyxis Baekryungensis Dsm 16222 MTKKITANQIIGEIGENEVRGRFLTLGWQFDGRSRLEAGIDGIAEVMNEGQPMARMIAVQIKSTKEGKYTSESDTSFTYLLRTQDLAYWRGSNLPVIVVFYRQSDHSFYWKEVSRDAGPGERRLNIDKVADLFNASTVNKLAALTVPKTGLGYYVPPLGGGEDALINMLPLTLPNEMYIASTTYEPRKAIAVILNGDGPKRFDWVINGGTFWSFHDPRTSACSEIVDIDQVEAINTKELALHDDIDEQNRFSHLLRQTLRYQTDSDLGWDKDHKALYFRAIEREVSRNFAYTSSKKKTDANVVSVFKNSKDETRVSFVRHHAFSPRFELMADQWYLIITPTYYYTTNGYAPHQFAAPLLAGKKRLDKSAALRGQVIMWHRFLTQSDHEDLFHSEETPEAYLMFGEPPSIHLDVRVPEDGWVKEKVKRIDEAAQGEGLFSDDI
DREN-APAZ E 442 Novosphingopyxis Baekryungensis Dsm 16222 MTKKITANQIIGEIGENEVRGRFLTLGWQFDGRSRLEAGIDGIAEVMNEGQPMARMIAVQIKSTKEGKYTSESDTSFTYLLRTQDLAYWRGSNLPVIVVFYRQSDHSFYWKEVSRDAGPGERRLNIDKVADLFNASTVNKLAALTVPKTGLGYYVPPLGGGEDALINMLPLTLPNEMYIASTTYEPRKAIAVILNGDGPKRFDWVINGGTFWSFHDPRTSACSEIVDIDQVEAINTKELALHDDIDEQNRFSHLLRQTLRYQTDSDLGWDKDHKALYFRAIEREVSRNFAYTSSKKKTDANVVSVFKNSKDETRVSFVRHHAFSPRFELMADQWYLIITPTYYYTTNGYAPHQFAAPLLAGKKRLDKSAALRGQVIMWHRFLTQSDHEDLFHSEETPEAYLMFGEPPSIHLDVRVPEDGWVKEKVKRIDEAAQGEGLFSDDI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*AP*UP*AP*CP*U)-3') g 5 NA AUACU
RNA (5'-R(P*AP*UP*AP*CP*U)-3') h 5 NA AUACU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-09-30
Deposition Author(s): Zhuang, L.