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FASTA Sequence PDB Format mmCIF Format
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9JHB

Cryo-em structure of racric1-cascade ic1-complex ii

PDB DOI: 10.2210/pdb9jhb/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough

Deposited: 2024-09-09
Deposition Author(s): Feng, Y. , Li, S. , Wang, H. , Zhang, K. , Zhang, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.39 Å

9jhb
Literature

Cryo-em structure of racric1-cascade ic1-complex ii

Feng, Y. , Li, S. , Wang, H. , Zhang, K. , Zhang, S.

Primary Citation of Related Structures: 9JHB


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RacrIC1 (124-MER) a 124 NA UGGAUCGAAACACGACCUCGAGUCUGGUAAAGAAACCGCUGCUGCGAAAUUUGAACGCCAGCACAUGGACUCGUCUACUAGCGCAGCUUAAUUAACCUAGGCUGCUGCCACCGCUGAGCAAUAA

Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated protein, CT1133 family B 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, CT1133 family E 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, CT1133 family F 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, CT1133 family G 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, CT1133 family H 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, CT1133 family I 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, CT1133 family J 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, CT1133 family R 123 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough SLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKKNKEN
CRISPR-associated protein, TM1801 family C 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family D 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family K 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family L 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family M 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family N 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family O 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family P 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
CRISPR-associated protein, TM1801 family Q 289 Bifidobacterium Pseudocatenulatum , Nitratidesulfovibrio Vulgaris Str. Hildenborough TAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRKIRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVEDAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAEKQQGDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-09-09
Deposition Author(s): Feng, Y. , Li, S. , Wang, H. , Zhang, K. , Zhang, S.