9JG3
Structure of cas12p-trxa-guide rna-target dna complex(33-bp dsdna)
PDB DOI: 10.2210/pdb9jg3/pdb
Classification: RNA BINDING PROTEIN/RNA/DNA Organism(s): Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct
Deposited: 2024-09-05 Deposition Author(s): Ji, Q.J. , Wang, Y.J. , Wang, Z.P.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.2 Å
Structure of cas12p-trxa-guide rna-target dna complex(33-bp dsdna)
Ji, Q.J. , Wang, Y.J. , Wang, Z.P.
Primary Citation of Related Structures: 9JG3
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Cas12p | A | 741 | Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct | MGSSHHHHHHSSGLVPRGSMSDSEVNQEAKPEVKPEVKPETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGHSSLEVLFQGPMKTIKIKIKLTTDQVQLCDRYLEELTWLWNLTLSNQLHNHCVTWYAWAAKLSADLDKATEKLDKLKPEQQQLVKDYYRTKDKPRLTKKEQELVAKFDIFARWSSFSLDGIIPVPLRLGNSGYEGLSCQIATGGNYWKRDENINIPINTKKGIIHVKGYKLVKGDKLWQRIEIVPHKYRTFPGGKFEGRELTTLEKLDNVNGLNTLRAFQNLPDLQVSSHYIGGLLAFFKESWSAFLDPKRMNSRKPKFKKDSDKITTLSNNQCAPNRIDVNKNIVTVTGFSPITIIDKNWVKRLNLSQVLPRTYMLTQNPSGYYINIVIAHPLHEEKIALVKKLPKVKKEFGEDSQEYEDIKSKIKFLEQQIKESSIVKGKDLSVGIDPGVQAVVSTDHGALFLPNLTRERVSIHIEELQSRLDNAELINDKKWKSLGNKTPRIKTKNETKLQEKISRLHERGANSSNAFNHKLSTRLSRTYEHIAWEDTQINNLLKQVEPKALPEGVGYAHNGASAKRGLNWIMRQRCLSDLKAKTKQKTENRGGNFHEPPANYSSQTCHCCGQKGERRSQHEFVCKNSDCKLFDIPQQADTNAARNHKQNGGFELGEVKYHNVKLVYQKPK |
| Thioredoxin | E | 109 | Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct | MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (246-MER) | b | 246 | NA | AGAUUUAAGAAAAAACGCUUGACAAAGUAAUAAGAUUAGGCUAAUAUUAAAUUACCGCAGUUUGGGCGGGCAGCUAAUAAUAUUAGCUUAUGACUUCUAAGGCUUUUGCCUAAAAAGUAAGGGGGAAGGCGACAACCCCCAAAGACCAGCCGGAACUAUGGCUGGCAACUAUACCCUCUCUUUUGGAAACUUGCAACUAAGACUGGGGACUGAGGAUAGUUGAAACUGUCCUCUUCCUCUUUAGCG |
| DNA (33-MER) | c | 33 | NA | TGAGCGCTAAAGAGGAAGAGGACATACAGTTGA |
| DNA (33-MER) | d | 33 | NA | TCAACTGTATGTCCTCTTCCTCTTTAGCGCTCA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-09-05 Deposition Author(s): Ji, Q.J. , Wang, Y.J. , Wang, Z.P.