Structure of cas12p-trxa-guide rna-target dna complex(33-bp dsdna)
PDB DOI: 10.2210/pdb9jg3/pdb
Classification: RNA BINDING PROTEIN/RNA/DNA Organism(s): Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct
Deposited: 2024-09-05 Deposition Author(s): Ji, Q.J. , Wang, Y.J. , Wang, Z.P.
Structure of cas12p-trxa-guide rna-target dna complex(33-bp dsdna)
Ji, Q.J. , Wang, Y.J. , Wang, Z.P.
Primary Citation of Related Structures: 9JG3
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
Cas12p | A | 741 | Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct | MGSSHHHHHHSSGLVPRGSMSDSEVNQEAKPEVKPEVKPETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGHSSLEVLFQGPMKTIKIKIKLTTDQVQLCDRYLEELTWLWNLTLSNQLHNHCVTWYAWAAKLSADLDKATEKLDKLKPEQQQLVKDYYRTKDKPRLTKKEQELVAKFDIFARWSSFSLDGIIPVPLRLGNSGYEGLSCQIATGGNYWKRDENINIPINTKKGIIHVKGYKLVKGDKLWQRIEIVPHKYRTFPGGKFEGRELTTLEKLDNVNGLNTLRAFQNLPDLQVSSHYIGGLLAFFKESWSAFLDPKRMNSRKPKFKKDSDKITTLSNNQCAPNRIDVNKNIVTVTGFSPITIIDKNWVKRLNLSQVLPRTYMLTQNPSGYYINIVIAHPLHEEKIALVKKLPKVKKEFGEDSQEYEDIKSKIKFLEQQIKESSIVKGKDLSVGIDPGVQAVVSTDHGALFLPNLTRERVSIHIEELQSRLDNAELINDKKWKSLGNKTPRIKTKNETKLQEKISRLHERGANSSNAFNHKLSTRLSRTYEHIAWEDTQINNLLKQVEPKALPEGVGYAHNGASAKRGLNWIMRQRCLSDLKAKTKQKTENRGGNFHEPPANYSSQTCHCCGQKGERRSQHEFVCKNSDCKLFDIPQQADTNAARNHKQNGGFELGEVKYHNVKLVYQKPK |
Thioredoxin | E | 109 | Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct | MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA |
Nucleic Acids / Hybrid | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
RNA (246-MER) | b | 246 | NA | AGAUUUAAGAAAAAACGCUUGACAAAGUAAUAAGAUUAGGCUAAUAUUAAAUUACCGCAGUUUGGGCGGGCAGCUAAUAAUAUUAGCUUAUGACUUCUAAGGCUUUUGCCUAAAAAGUAAGGGGGAAGGCGACAACCCCCAAAGACCAGCCGGAACUAUGGCUGGCAACUAUACCCUCUCUUUUGGAAACUUGCAACUAAGACUGGGGACUGAGGAUAGUUGAAACUGUCCUCUUCCUCUUUAGCG |
DNA (33-MER) | c | 33 | NA | TGAGCGCTAAAGAGGAAGAGGACATACAGTTGA |
DNA (33-MER) | d | 33 | NA | TCAACTGTATGTCCTCTTCCTCTTTAGCGCTCA |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-09-05 Deposition Author(s): Ji, Q.J. , Wang, Y.J. , Wang, Z.P.