Crystal structure of the hcov-hku1 rbd in complex with fab
PDB DOI: 10.2210/pdb9jcy/pdb
Classification: ANTIVIRAL PROTEIN Organism(s): Homo Sapiens , Human Coronavirus Hku1 (Isolate N1)
Deposited: 2024-08-30 Deposition Author(s): Duan, Y. , Liu, X. , Wang, H. , Yang, H. , Zhao, Z.
Method: X-RAY DIFFRACTION Resolution: 1.8 Å
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Spike protein S1 | A | 308 | Homo Sapiens , Human Coronavirus Hku1 (Isolate N1) | DLPDCDIDKWLNNFNVPSPLNWERKIFSNCNFNLSTLLRLVHTDSFSCNNFDESKIYGSCFKSIVLDKFAIPNSRRSDLQLGSSGFLQSSNYKIDTTSSSCQLYYSLPAINVTINNYNPSSWNRRYGFNNFNLSSHSVVYSRYCFSVNNTFCPCAKPSFASSCKSHKPPSASCPIGTNYRSCESTTVLDHTDWCRCSCLPDPITAYDPRSCSQKKSLVGVGEHCAGFGVDEEKCGVLDGSYNVSCLCSTDAFLGWSYDTCVSNNRCNIFSNFILNGINSGTTCSNDLSGLEVLFQGPGGSHHHHHHHH |
Heavy chain of Fab | C | 235 | Homo Sapiens , Human Coronavirus Hku1 (Isolate N1) | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGSMHYSGSSHYKPSLKSRIAMSVDTSKNQFSLNLNSVTAADTAVYYCAREGGSSGYDYVYYFDDWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH |
Light chain of Fab | B | 214 | Homo Sapiens , Human Coronavirus Hku1 (Isolate N1) | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Method: X-RAY DIFFRACTION