PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9IMB

The crystal structure of human m5c methyltransferase nsun6 bound to its s-adenosyl-l-methionine analog and a nectin-2 3'-utr rna substrate

PDB DOI: 10.2210/pdb9imb/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2024-07-02
Deposition Author(s): Lv, M.Q. , Pu, T. , Zhong, F.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

9imb
Literature

The crystal structure of human m5c methyltransferase nsun6 bound to its s-adenosyl-l-methionine analog and a nectin-2 3'-utr rna substrate

Lv, M.Q. , Pu, T. , Zhong, F.M.

Primary Citation of Related Structures: 9IMB


Proteins
Molecule Chains Sequence Length Organism Sequence
tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 B 469 Homo Sapiens , Synthetic Construct MSIFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHLASVQHVKNLLLDELQKQFNGLSVPILQHPDLQDVLLIPVIGPRKNIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDIKGKCKKGAKEFDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYLSPSFDSVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPNMACTWSVKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALTKFPCLQLQPQEPQIGGEGMRGAGLSCEQLKQLQRFDPSAVPLPDTDMDSLREARREDMLRLANKDSIGFFIAKFVKCKST
tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 A 469 Homo Sapiens , Synthetic Construct MSIFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHLASVQHVKNLLLDELQKQFNGLSVPILQHPDLQDVLLIPVIGPRKNIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDIKGKCKKGAKEFDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYLSPSFDSVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPNMACTWSVKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALTKFPCLQLQPQEPQIGGEGMRGAGLSCEQLKQLQRFDPSAVPLPDTDMDSLREARREDMLRLANKDSIGFFIAKFVKCKST

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*GP*CP*CP*CP*UP*CP*UP*UP*CP*AP*UP*CP*UP*CP*CP*AP*AP*AP*GP*AP*GP*GP*GP*C)-3') d 24 NA GCCCUCUUCAUCUCCAAAGAGGGC
RNA (5'-R(*GP*CP*CP*CP*UP*CP*UP*UP*CP*AP*UP*CP*UP*CP*CP*AP*AP*AP*GP*AP*GP*GP*GP*C)-3') c 24 NA GCCCUCUUCAUCUCCAAAGAGGGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-07-02
Deposition Author(s): Lv, M.Q. , Pu, T. , Zhong, F.M.