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9IG7

Kod-h4 dna polymerase mutant in a binary complex with dna:dna containing two atna nucleotides

PDB DOI: 10.2210/pdb9ig7/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Thermococcus Kodakarensis Kod1 , Synthetic Construct

Deposited: 2025-02-19
Deposition Author(s): Betz, K. , Gutfreund, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.6 Å

Literature

Kod-h4 dna polymerase mutant in a binary complex with dna:dna containing two atna nucleotides

Betz, K. , Gutfreund, C.

Primary Citation of Related Structures: 9IG7


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase A 774 Thermococcus Kodakarensis Kod1 , Synthetic Construct MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEEVKKITAERHGTVVTVKRVEKVQKKFLGRPVEVWKLYFTHPQDQPAIRDKIREHPAVIDIYEYDTPFAKRYLIDKGLVPMEGDEELKMLAFAIATLYHEGEEFAEGPILMISYADEEGARVITWKNVDLPYVDVVSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWETGENLERVARYSMEDAKVTYELGKEFLPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDEKELARRRQKYEGGYVKEPERGLWENIVYLDFRSLYPSIIITHNVSPDTLNREGCGEYDVAPQVGHRFCKDLPGFIPSLLGDLLEERQKIKKKMKATIDPIERKLLDYRQRLIKILANSVYGHMGFENARWYCKECAESVTAWGREYLTMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKAMEFLKYINAKLPGALELEYEGFYKRGFFVTKKKYAVIDEEGKITTRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAVRIVKEVTEKLSKYEVPPEKLVIHKQITRDLKDYKATGPHVAVAKRLAARGVKIRPGTVISYIVLKGSGRIGDRAIPFDEFDPTKHRYDAEYYIEKQVLPAVERILRAFGYRKEDLRYQKTRQVGLSAWLKPKGT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*CP*A)-3') p 13 NA GACCACGGCCACA
DNA/RNA (5'-D(*AP*AP*C)-R(P*(A6U)P*(A6G))-D(P*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') t 16 NA AACXXTGGCCGTGGTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-02-19
Deposition Author(s): Betz, K. , Gutfreund, C.