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FASTA Sequence PDB Format mmCIF Format
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9I7W

Extended and wrapped protein p7 dimers of dimers, the p1 layer and the rna-dependent rna polymerase p2 in transcribing particles of bacteriophage phi6

PDB DOI: 10.2210/pdb9i7w/pdb

Classification: VIRAL PROTEIN
Organism(s): Cystovirus Phi6 , Synthetic Construct

Deposited: 2025-02-03
Deposition Author(s): Huiskonen, J.T. , Ilca, S.L. , Kumpula, E.-P.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.8 Å

9i7w
Literature

Extended and wrapped protein p7 dimers of dimers, the p1 layer and the rna-dependent rna polymerase p2 in transcribing particles of bacteriophage phi6

Huiskonen, J.T. , Ilca, S.L. , Kumpula, E.-P.

Primary Citation of Related Structures: 9I7W


Proteins
Molecule Chains Sequence Length Organism Sequence
Major inner protein P1 X 766 Cystovirus Phi6 , Synthetic Construct MFNLKVKDLNGSARGLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWEVGKGNIDPVMYARLFFQYAQAGGALSVDELVNQFTEYHQSTACNPEIWRKLTAYITGSSNRAIKADAVGKVPPTAILEQLRTLAPSEHELFHHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQATFKAKGALAPALISQHLANAATTAFERSRGNFDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTLAAARRTSRDDAEKLAIDGRRMQNAVTLLRKIEMIGTTGIGASAVHLAQSRIVDQMAGRGLIDDSSDLHVGINRHRIRIWAGLAVLQMMGLLSRSEAEALTKVLGDSNALGMVVATTDID
RNA-directed RNA polymerase U 664 Cystovirus Phi6 , Synthetic Construct PRRAPAFPLSDIKAQMLFANNIKAQQASKRSFKEGAIETYEGLLSVDPRFLSFKNELSRYLTDHFPANVDEYGRVYGNGVRTNFFGMRHMNGFPMIPATWPLASNLKKRADADLADGPVSERDNLLFRAAVRLMFSDLEPVPLKIRKGSSTCIPYFSNDMGTKIEIAERALEKAEEAGNLMLQGKFDDAYQLHQMGGAYYVVYRAQSTDAITLDPKTGKFVSKDRMVADFEYAVTGGEQGSLFAASKDASRLKEQYGIDVPDGFFCERRRTAMGGPFALNAPIMAVAQPVRNKIYSKYAYTFHHTTRLNKEEKVKEWSLCVATDVSDHDTFWPGWLRDLICDELLNMGYAPWWVKLFETSLKLPVYVGAPAPEQGHTLLGDPSNPDLEVGLSSGQGATDLMGTLLMSITYLVMQLDHTAPHLNSRIKDMPSACRFLDSYWQGHEEIRQISKSDDAMLGWTKGRALVGGHRLFEMLKEGKVNPSPYMKISYEHGGAFLGDILLYDSRREPGSAIFVGNINSMLNNQFSPEYGVQSGVRDRSKRKRPFPGLAWASMKDTYGACPIYSDVLEAIERCWWNAFGESYRAYREDMLKRDTLELSRYVASMARQAGLAELTPIDLEVLADPNKLQYKWTEADVSANIHEVLMHGVSVEKTERFLRSVMPR
Nucleocapsid protein A 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Nucleocapsid protein B 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Nucleocapsid protein E 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Nucleocapsid protein F 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Nucleocapsid protein M 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Nucleocapsid protein N 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Nucleocapsid protein S 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Nucleocapsid protein T 111 Cystovirus Phi6 , Synthetic Construct TLYLVPPLDSADKELPALASKAGVTLLEIEFLHELWPHLSGGQIVIAALNANNLAILNRHMSTLLVELPVAVMAVPGASYRSDWNMIAHALPSEDWITLSNKMLKSGLLAN
Major inner protein P1 V 766 Cystovirus Phi6 , Synthetic Construct MFNLKVKDLNGSARGLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWEVGKGNIDPVMYARLFFQYAQAGGALSVDELVNQFTEYHQSTACNPEIWRKLTAYITGSSNRAIKADAVGKVPPTAILEQLRTLAPSEHELFHHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQATFKAKGALAPALISQHLANAATTAFERSRGNFDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTLAAARRTSRDDAEKLAIDGRRMQNAVTLLRKIEMIGTTGIGASAVHLAQSRIVDQMAGRGLIDDSSDLHVGINRHRIRIWAGLAVLQMMGLLSRSEAEALTKVLGDSNALGMVVATTDID
Major inner protein P1 W 766 Cystovirus Phi6 , Synthetic Construct MFNLKVKDLNGSARGLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWEVGKGNIDPVMYARLFFQYAQAGGALSVDELVNQFTEYHQSTACNPEIWRKLTAYITGSSNRAIKADAVGKVPPTAILEQLRTLAPSEHELFHHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQATFKAKGALAPALISQHLANAATTAFERSRGNFDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTLAAARRTSRDDAEKLAIDGRRMQNAVTLLRKIEMIGTTGIGASAVHLAQSRIVDQMAGRGLIDDSSDLHVGINRHRIRIWAGLAVLQMMGLLSRSEAEALTKVLGDSNALGMVVATTDID
Major inner protein P1 Z 766 Cystovirus Phi6 , Synthetic Construct MFNLKVKDLNGSARGLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWEVGKGNIDPVMYARLFFQYAQAGGALSVDELVNQFTEYHQSTACNPEIWRKLTAYITGSSNRAIKADAVGKVPPTAILEQLRTLAPSEHELFHHITTDFVCHVLSPLGFILPDAAYVYRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQATFKAKGALAPALISQHLANAATTAFERSRGNFDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTLAAARRTSRDDAEKLAIDGRRMQNAVTLLRKIEMIGTTGIGASAVHLAQSRIVDQMAGRGLIDDSSDLHVGINRHRIRIWAGLAVLQMMGLLSRSEAEALTKVLGDSNALGMVVATTDID
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-02-03
Deposition Author(s): Huiskonen, J.T. , Ilca, S.L. , Kumpula, E.-P.